Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2199 GTTGTTAACTTGAGGAGCCGTGGATATGGGCTAGCAGCAGATATATGGAGCTTGGGATGTACAGTATTGGAGATGTTAACACGACAACCTCCTTACTCTCATTTGGAACCATTGCAAGCCATATTTCAAATTGAAGGTGGTGAACCTCCACTTGTTCCAGAATCAATATCAACAAATGGCCGAGATTTCATTCTTAAATGCTTACAAGCTGATCCAAACAAACGACCAACTGCTTCTCAACTATTGGATCATCCATTTGTAAACATTTGCACCATCAAGAATGGAGAACAAAACAAAGACGTAGACTACGAGAGGAAATACATAAGTGAGATTCTATAA 339 0.3953 VVNLRSRGYGLAADIWSLGCTVLEMLTRQPPYSHLEPLQAIFQIEGGEPPLVPESISTNGRDFILKCLQADPNKRPTASQLLDHPFVNICTIKNGEQNKDVDYERKYISEIL* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2199 112 PANTHER BNAA02G34600D PROTEIN 1 88 - -
Pvu6g2199 112 Gene3D Transferase(Phosphotransferase) domain 1 3 109 - -
Pvu6g2199 112 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2199 112 Pfam Protein kinase domain 4 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2199 112 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 88 - -
Pvu6g2199 112 SUPERFAMILY Protein kinase-like (PK-like) 4 88 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2199 Pvu-Chr6 31367984 31368556 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2199 1 87 MAP Kinase Kinase Kinase AT4G08500 61.364 1.73e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu6g2199 Pkinase 1.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2199 - - pvu:PHAVU_006G2125000 232.646