Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2198 ATGGCAAGTTTCATTGGAAGAATTGAAGAGGCGATTAAGAGTAGCAGTGATTCAATTTTGGGAAAAGGAGAATACCGCGTCCGTGGATTTGGTTCGGCAGTAGACAGTGGCATAAGGAGTAGGACTGCGTCAAATTTGGAAACAGAGGAGAGTGTTGATGGTTTTAGTTGGGCGGTGGATAATGCAATGAAGAGTACGGTTGCGCCAAATCCCCCTTCTCTCCACAGTTTCGCTTCGGCAGTGGATAATGCCATCAGTAGCAACGTTGATGCCGAAGCTGAGGCCGAAGTTGAAAGTGATGCAGAAGCTGAAACGGAAGAGTCGGCGAACAGAGAGAGGTACATGGGGCTATGGCAGAAGGGGTACATGTTAGGGAAGGGCTCCTTCGGAACCGTCTACGAAGCCTTCGCAGATGATGGGAACTTTTTTGCTGCAAAGGAGGTGTCCTTGCTGGATGATAGAAATCAGGGCAAACAGAGCATTTTCCAACTTCGACAGGAAATATCTCTTTTGAGTCAGTTCCGGCATGATAACATCGTTCAATATCTAGGCACAGGCAAGGATAATGACAAGTTGTATATCTTCCTCGAGCTTGTAACAAAAGGATCATTAGCAAACCTCTATAAAAAGTATCGTTTAATGGACTCCCAAGTTTCTGCATATACAAGGCAAATTTTAAGTGGCTTGAAGTATCTTCATGACCGTAATGTGATTCACAGGGACATAAAGTGTGCCAATATACTGGTTGATGCAACTGGGTCCGTCAAGCTTGCAGATTTTGGTTTGGCAAAGGTTACAAAGTTAAACAATGTTAATTCAGTTGGAGGCTCTCTGTACTGGATGGCCCCTGAG 852 0.4495 MASFIGRIEEAIKSSSDSILGKGEYRVRGFGSAVDSGIRSRTASNLETEESVDGFSWAVDNAMKSTVAPNPPSLHSFASAVDNAISSNVDAEAEAEVESDAEAETEESANRERYMGLWQKGYMLGKGSFGTVYEAFADDGNFFAAKEVSLLDDRNQGKQSIFQLRQEISLLSQFRHDNIVQYLGTGKDNDKLYIFLELVTKGSLANLYKKYRLMDSQVSAYTRQILSGLKYLHDRNVIHRDIKCANILVDATGSVKLADFGLAKVTKLNNVNSVGGSLYWMAPE 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2198 284 Pfam Protein kinase domain 120 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2198 284 Gene3D Transferase(Phosphotransferase) domain 1 118 284 - -
Pvu6g2198 284 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 75 284 - -
Pvu6g2198 284 SMART serkin_6 118 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2198 284 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Pvu6g2198 284 SUPERFAMILY Protein kinase-like (PK-like) 117 284 IPR011009 -
Pvu6g2198 284 PANTHER BNAA02G34600D PROTEIN 75 284 - -
Pvu6g2198 284 ProSiteProfiles Protein kinase domain profile. 118 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2198 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2198 Pvu-Chr6 31358955 31362553 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2198 118 284 MAP Kinase Kinase Kinase AT4G08500 67.066 2.48e-76 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu6g2198 Pkinase 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2198 - K13414 pvu:PHAVU_006G2125001 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2198 6 31358955 31362553 Pvu2g2082 2 36221878 36227416 PCT