Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2195 ATGCCAAAATCGAAGAGAAATAGACAAGTTACGCTATCGAAGACGAAGAAGAAGGGAAGGGGTCATAAAGAGACCATAGTGAACGGAATAAAGGAGGCGGTAGAAAAGTATGCGTGTGTATACGTGTTTTCGTTCGAGAGCATGCGGAATCAGAAATTGAAGGAGTTCAGGGAACAACTGAAATCGAGTAGCAGATTCTTTCTCGGCTCTAACAAAGTAATGCAAGTTGCTTTAGGTCGTTCCGCCGCCGATGAGATCAGTTCCGGCATTCATAAGGTTTCAAAGCTATTGCGAGGAGATGCTGGCATGTTTCTTACGAATTTGTCTAAGGAAGAAGTTGAAAGGCTCTTTAAAGAATTTAAAGAGTATGACTTTGCAAGAACGGGAAGCCTTGCCACGGAAAAGGTGGATCTCAAAGAGGGTCCCTTGGAGCAGTTTACTCATGAGATGGAACCTTTTCTACGGAAGCAAGGCATGCCTGTTAGGTTAAATAAAGGAGTTGTGGAGCTTGTTTCCGATTTTGTTGTTTGTGAGGAAGGAAAGCCCTTGTCACCTGAAGCTTCTCGTATACTGCGTTTAATGGGAATCAAGATGGCTACATTTCGACTTAACCTAATTTGCAGGTGGAGTCCCGATGAGTTTGAACTATACATCGATGGACCTGATGAATCAGATGTTGAATGCTCATAG 690 0.4319 MPKSKRNRQVTLSKTKKKGRGHKETIVNGIKEAVEKYACVYVFSFESMRNQKLKEFREQLKSSSRFFLGSNKVMQVALGRSAADEISSGIHKVSKLLRGDAGMFLTNLSKEEVERLFKEFKEYDFARTGSLATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLMGIKMATFRLNLICRWSPDEFELYIDGPDESDVECS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2195 229 CDD Ribosomal_P0_like 22 184 IPR033867 GO:0000027
Pvu6g2195 229 PANTHER RIBOSOME ASSEMBLY FACTOR MRT4 1 228 - -
Pvu6g2195 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 228 - -
Pvu6g2195 229 Gene3D - 125 198 IPR043164 -
Pvu6g2195 229 MobiDBLite consensus disorder prediction 1 21 - -
Pvu6g2195 229 Pfam Ribosomal protein L10 20 121 IPR001790 -
Pvu6g2195 229 Gene3D - 30 211 IPR043141 -
Pvu6g2195 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Pvu6g2195 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Pvu6g2195 229 MobiDBLite consensus disorder prediction 1 23 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2195 32 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 21.023 6.41e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2195 K14815 - gmx:100500064 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2195 6 31341057 31343175 Pvu6g2195 6 31341057 31343175 ECH