Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2191 ATGGAAGCTCACCGGAACCCGTCGAAGCCGCGCCTTGAGCGGCGGAACGCCATGAAGAACATCGATTACCGGTTGAAGGAGGAAGAAGATACAGACACCGACACGGACATAGACATAGATAGTTTGGATGAAAGGAGTTTCCGAGTCGAAGGAATCGACGGCGAATTTGACCGTATCTTTCGGAGCTTGGGCCTGTCCGGGCCCGAGGACTTTGCCATCCCAGCCGCGGCCTGGAAACAAGCCCAGGCCCACAAGGCCCGCAGCACCATGAACCTTCAACACGAACCGTCACAGAATAAAAAACAGAGTGAGGGGGGAATAAACGGCGTTAGGCCTCCCGTTTTGGAACCGACGCAGGTTAGTTCTACTTGGAGCTCCCAACAACCTACGGAGAGGGACCCACTTTCTGATTCCGTGTCACGTGATGATGACAGTGATGTTGGTGTTGAAGCTGAAATTGAAAAGGTTTCTGGTTCGGTCGGGAATGAGACCTTTGATGTTCATAATCTGTCGCCGAATGTGAACGGTTATTTCGGGTCGTGGCAAAAGGGCGAGATCTTGGGAAAGGGTTCTTTTGGAACTGTTTATGAAGGCTTCACCGATGATGGGAACTTTTTTGCTGTAAAGGAGGTGTCTTTACTGGATGACGATAGCCAGGGCAAACAGAGCATTTTCCAGCTTCAGCAGGAAATCTCTCTTTTGAGTCAGTTCCGACACGACAACATAGTTCGATATCTTGGCACTGACAAGGATAATGATAAGCTGTATATCTTCCTTGAACTTGTAACAAAAGGATCATTAGCAAGTCTCTATCAAAAGTATCGATTAAGGGACTCACAAGTGTCTGCATACACAAGACAGATTTTGAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAAATGGGTCCGTCAAGCTTGCAGATTTTGGATTGGCGAAGGCAACCAAGTTGAATGATGTTAAATCAAGTAAAGGCTCTCCTTACTGGATGGCCCCAGAGGTTGTTAACTTGAGGAACCGTGGATATGGGTTAGCAGCTGATATATGGAGCTTAGGATGTACAGTACTAGAGATGTTGACGCGCCAACCTCCTTACTCTCATTTGGAAGGAATGCAAGCGATATTTCGAATTGGCAGTGGTCAACCTCCACCTGTTGCAGAATCTTTGTCAACAGATGCTCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCTAACAAACGGCCAACTGCTGCGCGGCTATTGGATCATCCATTTGTAAAGAGAACTCTTCTGTCTCCCATTAGTCCAATTTCTCCAAGTATTAATCTTTTACTGTCTTAA 1365 0.4645 MEAHRNPSKPRLERRNAMKNIDYRLKEEEDTDTDTDIDIDSLDERSFRVEGIDGEFDRIFRSLGLSGPEDFAIPAAAWKQAQAHKARSTMNLQHEPSQNKKQSEGGINGVRPPVLEPTQVSSTWSSQQPTERDPLSDSVSRDDDSDVGVEAEIEKVSGSVGNETFDVHNLSPNVNGYFGSWQKGEILGKGSFGTVYEGFTDDGNFFAVKEVSLLDDDSQGKQSIFQLQQEISLLSQFRHDNIVRYLGTDKDNDKLYIFLELVTKGSLASLYQKYRLRDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQAIFRIGSGQPPPVAESLSTDARDFILKCLQVNPNKRPTAARLLDHPFVKRTLLSPISPISPSINLLLS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2191 454 MobiDBLite consensus disorder prediction 84 105 - -
Pvu6g2191 454 MobiDBLite consensus disorder prediction 1 37 - -
Pvu6g2191 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Pvu6g2191 454 SMART serkin_6 181 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2191 454 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 7 85 - -
Pvu6g2191 454 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 99 437 - -
Pvu6g2191 454 MobiDBLite consensus disorder prediction 1 30 - -
Pvu6g2191 454 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 7 85 - -
Pvu6g2191 454 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 99 437 - -
Pvu6g2191 454 MobiDBLite consensus disorder prediction 82 148 - -
Pvu6g2191 454 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524
Pvu6g2191 454 ProSiteProfiles Protein kinase domain profile. 181 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2191 454 Gene3D Transferase(Phosphotransferase) domain 1 179 445 - -
Pvu6g2191 454 SUPERFAMILY Protein kinase-like (PK-like) 178 445 IPR011009 -
Pvu6g2191 454 Pfam Protein kinase domain 182 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2191 454 MobiDBLite consensus disorder prediction 115 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2191 Pvu-Chr6 31292079 31295880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2191 11 91 MAP Kinase Kinase Kinase AT4G08500 38.889 4.89e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu6g2191 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2191 - K13414 var:108347588 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2191 6 31292079 31295880 Pvu6g2191 6 31292079 31295880 ECH
Pvu2g2082 2 36221878 36227416 Pvu6g2191 6 31292079 31295880 PCT