Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2176 ATGGTGGAAATAAAGGGAGTGATGAATGCAATGCATGAGCTGAAACCAGTGTTGTTGATGGTGTTAGTGCAAATTGCATACAGTGCTGTGAATGTGCTTTTCAAGCTCGCCATAAACGATGGAATGAGTGTAAAAGTTGCTACAGCATATCGTCTCGCTTTTGGATCTGCTTTCACTGTTCCTCTTGCTCTCATTTCTGAAAGGAACAAAAGACCAAAGATGACTTGGAGAGTGCTTTTCATGGCATGTCTTTGTGGATTATTCGGGGGAAGTTTATTTCAAAACCTTTTCTATGAATCCTTGGCCATAACATCAGCAACGTTTGCCTCCGCTCTCTACAATCTCATTCCAGCTATCACCTTTGTATTGGCCATCTCCTGCGGTTTCGAAAGGTTGAATTTGAGGGCAGCCGCAGGAAGGGCCAAGGTGTTGGGAACTATAATTGGAATTGGTGGGGCAATGTTGTTGACTTTTATCAAAGGTGCAGAAATTAATATCTGGCCCTTCCACATCAACCTTATGCATCCACATCAGCACCAAGATAGCCACGTGGCACAGTTTCATTCTGACTCTAGCAATAAGTTGTTGGGGGCTCTCTGTTCCATAGCAAGCTGCTTCTCTTTTTCTCTCTGGCTCACCATTCAGGCCAAGATGAGCAAAGAATACCCTTGTCACTATTCAAGCACGGCTCTGATGTCTACAGCAGGAGCAATACAAGCCACTGCTTTTGGTTTCTGTGTTGAGAGAGATCTGAGCCAATGGAAGTTGGGTTGGAATATTAGGTTACTTGCTGTGGCTTATTCGGGAATCGTGGCCTCTGGAATAGTAGTTATTATCACTGCATGGTGCATACAAAAGAGAGGGCCTCTCTTTGCGTCTGTTTTCAACCCCCTAATGCTTGTGCTTGTGGCTATTGCTGGTTCTTTGATGTTGAACGAGAACTTGTATGTAGGAAGTGTGGTTGGAGCAGTGCTGATAGTGTTTGGGTTGTACATGGTTCTGTGGGGTAAAAGTAAAGAGATGAAAAACATCACTCAGTTAGTTCCATCAGAGACCATTCGAGAAGCTGAAGCCATAGAAGTTGTTGTGGTGTCGACGCCAATGGATCATGAGAAACGTGACCACAAAAACCGAAGCCAAATCACTGATACTACAAGGAATGTGGACAAAGATTGTGAGGATTTGACCAAAAAATAA 1197 0.4378 MVEIKGVMNAMHELKPVLLMVLVQIAYSAVNVLFKLAINDGMSVKVATAYRLAFGSAFTVPLALISERNKRPKMTWRVLFMACLCGLFGGSLFQNLFYESLAITSATFASALYNLIPAITFVLAISCGFERLNLRAAAGRAKVLGTIIGIGGAMLLTFIKGAEINIWPFHINLMHPHQHQDSHVAQFHSDSSNKLLGALCSIASCFSFSLWLTIQAKMSKEYPCHYSSTALMSTAGAIQATAFGFCVERDLSQWKLGWNIRLLAVAYSGIVASGIVVIITAWCIQKRGPLFASVFNPLMLVLVAIAGSLMLNENLYVGSVVGAVLIVFGLYMVLWGKSKEMKNITQLVPSETIREAEAIEVVVVSTPMDHEKRDHKNRSQITDTTRNVDKDCEDLTKK* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2176 398 PANTHER WAT1-RELATED PROTEIN 14 370 IPR030184 GO:0016021|GO:0022857
Pvu6g2176 398 MobiDBLite consensus disorder prediction 369 398 - -
Pvu6g2176 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Pvu6g2176 398 PANTHER WAT1-RELATED PROTEIN 14 370 - -
Pvu6g2176 398 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020|GO:0016021
Pvu6g2176 398 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020|GO:0016021
Pvu6g2176 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2176 Pvu-Chr6 31200871 31203250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2176 14 391 Nodulin-like Gene Family AT1G25270 39.947 2.35e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2176 - - gmx:100798755 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2176 6 31200871 31203250 Pvu6g2176 6 31200871 31203250 ECH
Pvu2g2103 2 36443430 36445904 Pvu6g2176 6 31200871 31203250 PCT
Pvu6g2176 6 31200871 31203250 Pvu2g2102 2 36429157 36431813 PCT