Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2175 ATGAGAGATATAGGGAAAGTAGTACATGGGTTGAAACCAGCCCTTCTAATGTTGATGGTGCAGATTGCATTTGCTTCAGTCAACGTGCTCTACAAGTTTGCCTTAAACGATGGAATGAGTGTGAGCGTAATTACTGCCTACCGTCTCATGTTTGCAGCAGCTTCTACTGTTCCTCTTGCTCTTATTTTTGAAAGGAAAAACATACCAACACTGACTTGGAGGGTGATTTTAAAGGCATTTTTCTGTGGCCTATTCGGGGGAAGTCTATTCCAAAACCTTTATTTCGAGTCCTTGAAATTGATATCAGCAACATTTGGTTCTGCTGTTTATAATCTCATTCCTGCAGTCACTTTTATCTTGGCAGTAACTTGCGGTTTTGAAAAATTAAATTTCCAAAGGGCATCAGGTAAGGCTAAGGTGTTGGGAACAATAACAGGAGTTGGCGGGGCAATGATGCTGACATTTCTCAAAGGTGTAGAAATCAACATTTGGACCTCCCACATTAACCTTTTGCATAAAAAGGGTACCAGGGGAACACAGAATGATGACTCTGGAAGTAAAGTGCTAGGAGTCTTTTGTGGTTTTGGAAGCTGCTTCTGTTTTGCATTATGGCTCATTGTTCAGGCTCAGATGAGTAAAGAGTTCCCAGGCCATCACTCAAGCACAGCTTTGATGTCAGTAATGGGGGCAATTCAAGCCACTATTTATGCCCTGTGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAGCATTAGGCTTCTAACTGCAGCATATTCGGGAATTGTTTGCTCTGGAATAATGGTTGTTGTGATTGCATGGTGTGTAAGGATGAGAGGTCCAATGTATGCATCTGTTTTCAATCCTCTTTTGCTAGTGCTTGTGGCCATTGCTGGTTCCTTGATGTTGGATGAGAAGCTGTACATAGGAAGTGTGATGGGAGCAGTGCTAATTGTGATGGGATTGTACATGGTGCTGTGGGGTAAGAGCAAAGAAATGAAAAGAGTGAGTCACTTAGAAACTACTCCAGAACTAGAAGAAATTGAGGTTCATGATCAAAGTAGGTGCAGCAACGACAAGTACACCTGTAGTGAGAGCAATAGTGTTGGGAAGGATGATGATAATGCTTCAAAAAGCGAAGATGAAGGACAAGACAAGGAAAATAATGGAAAACAAGATATGGGTAGCTCCAATGGAAGTGTAGAAGGCCTAAAAGGTAGAACTTAG 1230 0.4211 MRDIGKVVHGLKPALLMLMVQIAFASVNVLYKFALNDGMSVSVITAYRLMFAAASTVPLALIFERKNIPTLTWRVILKAFFCGLFGGSLFQNLYFESLKLISATFGSAVYNLIPAVTFILAVTCGFEKLNFQRASGKAKVLGTITGVGGAMMLTFLKGVEINIWTSHINLLHKKGTRGTQNDDSGSKVLGVFCGFGSCFCFALWLIVQAQMSKEFPGHHSSTALMSVMGAIQATIYALCVEKDWSQWRLGWSIRLLTAAYSGIVCSGIMVVVIAWCVRMRGPMYASVFNPLLLVLVAIAGSLMLDEKLYIGSVMGAVLIVMGLYMVLWGKSKEMKRVSHLETTPELEEIEVHDQSRCSNDKYTCSESNSVGKDDDNASKSEDEGQDKENNGKQDMGSSNGSVEGLKGRT* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2175 409 MobiDBLite consensus disorder prediction 391 409 - -
Pvu6g2175 409 PANTHER WAT1-RELATED PROTEIN 12 352 - -
Pvu6g2175 409 MobiDBLite consensus disorder prediction 372 390 - -
Pvu6g2175 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 332 - -
Pvu6g2175 409 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Pvu6g2175 409 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
Pvu6g2175 409 PANTHER WAT1-RELATED PROTEIN 12 352 IPR030184 GO:0016021|GO:0022857
Pvu6g2175 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 152 - -
Pvu6g2175 409 MobiDBLite consensus disorder prediction 356 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2175 Pvu-Chr6 31187626 31189850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2175 11 360 Nodulin-like Gene Family AT1G25270 40.845 7.66e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2175 - - pvu:PHAVU_006G210200g 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2175 6 31187626 31189850 Pvu6g2175 6 31187626 31189850 ECH
Pvu2g2104 2 36454138 36462937 Pvu6g2175 6 31187626 31189850 PCT
Pvu6g2175 6 31187626 31189850 Pvu2g2103 2 36443430 36445904 PCT