Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2173 ATGGAGAAGAGGAACGTAGTGCATGCATTGAAACCAGTTCTTCTGCTGGTGATGGTGCAGGTTGCAAATGCTTGGGTCAATGTTCTCTACAAGCTAGCCCTTAACGATGGCATGAACTTGAGTGTCATTGTTGCTTACCGCTATGTTTTTGCAACTCTTTTCATTTCTCCACTTGCTTTTCTTATTGAAAGGAAGACGAGAACGAAGATGAGTTGGATGATACTGTTTCAGGCATTTGTATGCGGGTTAATTGGTTCAGGTGGGACCATAA 271 0.428 MEKRNVVHALKPVLLLVMVQVANAWVNVLYKLALNDGMNLSVIVAYRYVFATLFISPLAFLIERKTRTKMSWMILFQAFVCGLIGSGGTI 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2173 90 PANTHER WAT1-RELATED PROTEIN 10 86 IPR030184 GO:0016021|GO:0022857
Pvu6g2173 90 PANTHER WAT1-RELATED PROTEIN 10 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2173 Pvu-Chr6 31179481 31180855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2173 12 88 Nodulin-like Gene Family AT1G09380 44.156 3.41e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2173 - - pvu:PHAVU_006G2101001 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2173 6 31179481 31180855 Pvu6g2173 6 31179481 31180855 ECH