Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2172 ATGAAGAATGTCTGCAATGTGGTGCAGGCGTTGAAACCAACCCTGGTAATGCTGGTGGTGCAAGTAGGATATGCCGGTGTCAATATCTTCTACAAGCTCGCCGTTAACGACGGCATGAACTTGAGGATTGTTGTTGCCTACCGTTTTCTGTTTGCCACCATTTTCATGGCTCCACTTGCTCTCATTCTTGAAAGGAAGAAGAGGACAAAGATGAGTTGGAGAATACTGTTTCAGTCATTTTTTTGCGGCTTATTTGGGGGATCATTAGCTCAAAATTTCTACTTGCAAGCTCTCTCTTTAACATCTGCAACCTTTACATCGGCAATGGCTAATCTTGTACCAGGCATAACCTTTATCTTGGCCCTTTGCTTTGGTTTGGAAAGGTTAAATTTGAGAACAGCAGCTGGAAAAGCGAAAATAGCGGGTACATTAATTGGAATTGGTGGAGCAATGGTGCTGACTTTCGTTAAAGGCAAAGAAATCAAAATAGGGACGTTTCACTTTAACCTTTTGCACCAGAACGGTGCGCGCCCACCGGCGCAGGCTAGTGGTGCCAAGACTGTTTTGGGTTCTTTGTCCGCTCTGGCTAGTGGCGTGAGTTATGCGTTGTGGCTCATAATTCAGGCGAAGATGATTGAAAGATACCCTTGTCCTTACTCTAGTACGGCGTTGATGTCAATGTGGGGGGCACTGGTCTCCATCGTCATTGCACTTTGCCTTGAGAGGGACTGGACTCAGTGGAGGTTGGGTTGGAATATTAGGCTTTGGACTGCAGCTTATTCGGGTATTGTGGTTTCTGGGATTATGGTGGTTATGATTTCATGGTGCATCCGCATGAGAGGGCCATTGTTTGCCTCTGTTTTTAATCCTCTGATGCTTGTGTTGGTGGCCTTGGCTAGTTCTACCATGTTGAAGGAGACGCTGCATCTTGGATGCATTATTGGAGCAGTGCTGATTGTGTTGGGCTTGTACCTGGTTTTATGGGGTAAAAGTGAAGAGATGAAGAAGAAGAATCAATTGGTGGCAGCAGAGAACCCCCATGAGGATGAGTCTAATAAGGTGGAAGTAGTGGTGAGGTGTGAAGTGGAAGATAAAAGCAACCAAAAGAAAATGCATGAGAATGGTGAAAAAATAGTGAGGTGTCACCACGAAGATGGAGACTTAGACCATAATTCACATGAACACAGTGAGGGAAAAGGAAGGAACTGA 1209 0.4524 MKNVCNVVQALKPTLVMLVVQVGYAGVNIFYKLAVNDGMNLRIVVAYRFLFATIFMAPLALILERKKRTKMSWRILFQSFFCGLFGGSLAQNFYLQALSLTSATFTSAMANLVPGITFILALCFGLERLNLRTAAGKAKIAGTLIGIGGAMVLTFVKGKEIKIGTFHFNLLHQNGARPPAQASGAKTVLGSLSALASGVSYALWLIIQAKMIERYPCPYSSTALMSMWGALVSIVIALCLERDWTQWRLGWNIRLWTAAYSGIVVSGIMVVMISWCIRMRGPLFASVFNPLMLVLVALASSTMLKETLHLGCIIGAVLIVLGLYLVLWGKSEEMKKKNQLVAAENPHEDESNKVEVVVRCEVEDKSNQKKMHENGEKIVRCHHEDGDLDHNSHEHSEGKGRN* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2172 402 PANTHER WAT1-RELATED PROTEIN 12 365 - -
Pvu6g2172 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Pvu6g2172 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 331 - -
Pvu6g2172 402 MobiDBLite consensus disorder prediction 365 402 - -
Pvu6g2172 402 PANTHER WAT1-RELATED PROTEIN 12 365 IPR030184 GO:0016021|GO:0022857
Pvu6g2172 402 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Pvu6g2172 402 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2172 Pvu-Chr6 31167753 31172837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2172 1 353 Nodulin-like Gene Family AT1G68170 43.626 3.43e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2172 - - vra:106774988 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2105 2 36468883 36471341 Pvu6g2172 6 31167753 31172837 PCT