Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2165 ATGGTTGGGAGTGTTCACGGTTTAAATGAGGATTTGAGAATCAACGGAGCAGTCGAACCGTTGCCTGAGGATTTTGACGCAACATCTTTAGTCATGGATCCTGTGCCTCCTGCAGTTGTAGACAACGGCAATGAAGAGGTGCAGGTCTATAAGGAAAAAGAGAAAAGACTAATAGTTCTGGGAAGAAATATTCATACCATGTCTCTAGAAGTCACAGAGCCTGATGCAGATGACGACATTACTGGGGACCGGGAAGCTCATATCGCAAGTGTGTTGGCCAGATACAAAAGAGCTTTGACTGAAAGGACAAAACATCATTTAGGGTACCCCTATAATTTGGATTTCGATTATGGTGCACTCTCACAACTTCAGCATTTTTCTATAAATAACCTGGGAGATCCATTTATTGAAAGCAACTATGGTGTCCACTCCCGTCAATTTGAAGTTGGTGTTTTGGATTGGTTTGCTCGACTGTGGGAACTGGAAAAAAATGAGTATTGGGGCTATATAACAAACTGTGGTACAGAAGGAAATCTCCATGGCATCCTAGTTGGGAGAGAGGTTTTCCCAAATGGGATTTTGTACGCCTCACGAGAGTCACATTATTCTGTTTTTAAAGCTGCTCGAATGTACAGAATGGAGTGTGTGAAGATTGATACTCTTTGGTCTGGGGAGATTGATTGTGATGATTTCAAGGCCAAGCTTCTTCGTAATCAGGACAAGCCAGCAATTGTAAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGATCTTGATCTGGTTATAAAGAAACTTGAAGAAGCTGGATTTTCGCAGGACAGATTCTACATCCACTGTGACGGGGCCTTGTTTGGTCTCATGATGCCTTTCGTGAAACGAGCTCCGAAAGTTACTTTTAAGAAGCCTATTGGCAGTGTCAGTGTTTCTGGCCACAAATTTGTAGGTTGTCCCATGCCTTGTGGTGTGCAGATAACAAGATTGGATTATGTTAATGCTCTTTCTAGGGATGTGGAATACCTTGCTTCTAGGGATGCCACGATCATGGGTAGTCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCTTGAATCGGAAAGGATACAGAGGTTTCCAGAAAGAAGTACAGAAATGCTTGCGAAATGCACACTACTTCAAAGATCGCCTTGTTGAGGCTGGGATTGGTGCAATGCTTAATGAGCTGAGCAGCACAGTTGTGTTTGAGAGGCCACACGATGAGGAATTTATACGCAGGTGGCAGTTGGCATGCAAGGGGAATATTGCACATGTGGTGGTGATGCCAAACATCACTATTGAGAAGCTGGATGATTTTCTGAACGAGCTTCTGGAGAAGCGTACTACCTGGTTTCAAGATGGAAAGGATCAACCTTACTGTATATCGGCAGACGTAGGTGAAAAGAATTGCCTTTGTGCTTTGCACAAGTGA 1452 0.4353 MVGSVHGLNEDLRINGAVEPLPEDFDATSLVMDPVPPAVVDNGNEEVQVYKEKEKRLIVLGRNIHTMSLEVTEPDADDDITGDREAHIASVLARYKRALTERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVFPNGILYASRESHYSVFKAARMYRMECVKIDTLWSGEIDCDDFKAKLLRNQDKPAIVNVNIGTTVKGAVDDLDLVIKKLEEAGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLDYVNALSRDVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKDRLVEAGIGAMLNELSSTVVFERPHDEEFIRRWQLACKGNIAHVVVMPNITIEKLDDFLNELLEKRTTWFQDGKDQPYCISADVGEKNCLCALHK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2165 483 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 307 328 IPR021115 GO:0016831
Pvu6g2165 483 Gene3D Aspartate Aminotransferase, domain 1 366 454 IPR015422 GO:0003824
Pvu6g2165 483 Gene3D - 121 365 IPR015421 GO:0003824
Pvu6g2165 483 SUPERFAMILY PLP-dependent transferases 103 453 IPR015424 -
Pvu6g2165 483 Pfam Pyridoxal-dependent decarboxylase conserved domain 193 404 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pvu6g2165 483 PANTHER SERINE DECARBOXYLASE 1 483 - -
Pvu6g2165 483 PANTHER - 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2165 Pvu-Chr6 31103236 31107592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2165 206 389 Calmodulin-binding Proteins AT1G65960 26.943 6.37e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2165 K25193 - gmx:100785163 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2107 2 36490051 36492899 Pvu6g2165 6 31103236 31107592 PCT