Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2148 ATGGAAGTTCTCTCGATAGCTTCAACTCTCACCATTTCCAAATCATCTCAAACGTTTCCACTCCCAAAGAAACACCAAACACCACATCCTCCTCCCACGCGCTTCTCAGTCTCCTGCAGAGCCACGAAACAGCTTCGAGGTGTGGAACACGACTTGTACAAGGTTCTAAGCCTCAGTCCCAACACTGCAACCTCCGACGACATCAAGAAAGCCTACAGATCAATGGCTCTTCAGTGCCACCCCGACGTGTGCCACGACGGTTCCAGAAAAGAGGAGTTGACGAGGATGTTTGTGCAACTCAACGAAGCTTACACCACCTTGTCCAATCCAAGGCTTCGAGCAGAGTATGACTATGAATTGGGTTTGAGAAGCAGCAGAATGAGCGTTGGTAACGACAGTTGGAGAATGAGATGGGAGGACCAGCTCATGGAGTTGAAGAGAAGATCTCACAACCGTATGCAACATAATCGTGGATCGTGGGGCACAAGAGTCAGAGCACACACCATGAACTCAAATTAG 519 0.4913 MEVLSIASTLTISKSSQTFPLPKKHQTPHPPPTRFSVSCRATKQLRGVEHDLYKVLSLSPNTATSDDIKKAYRSMALQCHPDVCHDGSRKEELTRMFVQLNEAYTTLSNPRLRAEYDYELGLRSSRMSVGNDSWRMRWEDQLMELKRRSHNRMQHNRGSWGTRVRAHTMNSN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2148 172 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 8 170 - -
Pvu6g2148 172 CDD DnaJ 51 109 IPR001623 -
Pvu6g2148 172 SMART dnaj_3 50 112 IPR001623 -
Pvu6g2148 172 SUPERFAMILY Chaperone J-domain 16 116 IPR036869 -
Pvu6g2148 172 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 8 170 - -
Pvu6g2148 172 PRINTS DnaJ domain signature 54 72 IPR001623 -
Pvu6g2148 172 PRINTS DnaJ domain signature 72 87 IPR001623 -
Pvu6g2148 172 PRINTS DnaJ domain signature 92 112 IPR001623 -
Pvu6g2148 172 Pfam DnaJ domain 51 117 IPR001623 -
Pvu6g2148 172 Gene3D DnaJ domain 38 155 IPR036869 -
Pvu6g2148 172 ProSiteProfiles dnaJ domain profile. 51 120 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2148 Pvu-Chr6 30992578 30993274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2148 53 117 C2H2 Transcription Factor Family AT1G74250 41.791 2.84e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2148 - - vun:114187063 268.085