Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2145 ATGGCAGCTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAGCAGGAGCCAAACCCTTCTGGCCACTGCTATTGGAGGCAAACTTGGTGTTGCAGTTAGTCCTAGAAGACTCATTGTGGTAGCTGCAGCAGCACCAAAGAAGTCATGGCTCCCTGGTGTTAGAGCTGGTGGCAATCTCGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTTTGGTTTTGACCCACTAGGCCTGGGGAAGGACCCGTCATTCCTCAAATGGTACAGAGAAGCTGAGCTGATTCATGGGAGGTGGGCAATGGCTGCAGTTTTAGGTATCTTTGTGGGGCAGGCCTGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCTCCTTTTTCGTTTGGTTCTCTTTTGGGAACCCAGTTGCTTCTTATGGGATGGGTTGAGAGCAAGAGATGGGTGGATTTCTTCAACCCAGACTCACAGTCAGTGGAATGGGCAACTCCATGGTCAAAAACTGCTGAGAACTTTGCCAATGCTACAGGTGAACAAGGCTACCCAGGAGGCAAATTCTTTGACCCTTTGGGCTTAGGTGGCGCTACCAAGGATGGAGTTTACATCCCAGATGCAGAGAAGCTGGAAAGATTGAAATTAGCTGAGATTAAGCATGCCAGGATTGCTATGTTGGCCATGCTCATTTTCTACTTTGAGGCTGGACAAGGAAAGACCCCCCTAGGCGCACTTGGCTTGTAA 777 0.5032 MAAATSGAVLNGLGSSFLSGGSRSQTLLATAIGGKLGVAVSPRRLIVVAAAAPKKSWLPGVRAGGNLVDPEWLDGSLPGDFGFDPLGLGKDPSFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANATGEQGYPGGKFFDPLGLGGATKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2145 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Pvu6g2145 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Pvu6g2145 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
Pvu6g2145 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Pvu6g2145 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2145 Pvu-Chr6 30973496 30975767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2145 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 81.923 7.89e-153 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2145 K08917 - gmx:100500118 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2145 6 30973496 30975767 Pvu6g2145 6 30973496 30975767 ECH
Pvu2g2133 2 36761947 36763367 Pvu6g2145 6 30973496 30975767 PCT