Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2143 ATGGAGGGACGGAGTTTGTCTGCAGTAACGTTTCTTTTGCTTGCTTTGGTGAATGTGAAGGTTGTGCATGGCCAAAGAACGCGTGTAGGGTTTTATGCTAGAACATGTCCTCGCGCTGAGTCCATTGTTAGATCCACAGTTCAATCCCATGTTAAATCTGATCCTACTTTGGCTGCTGGATTGCTTCGGATGCACTTTCACGATTGCTTTGTGCAAGGTTGTGACGGTTCTGTTCTCATTGCCGGTGTTGGCACTGAGAGAACAGCTTTTGCAAACCTTGGTTTAAGAGGATACGAGGTTATTGATGATGCGAAAACGCAACTCGAGGCTGCATGCCCCGGTATTGTGTCCTGTGCTGATATCCTTGCTCTTGCTGCTCGTGATTCCGTATTTCTGAGTGGTGGACTGAACTGGCAAGTGCCTACTGGACGCAGAGATGGGCACATATCACAGGCTTCTGATGTCACTAACTTGCCAGCTCCATTTGACTCTCTTGATGTTCAGAAACAAAAGTTCGCATCAAAGAGACTCAACACTCAAGACCTCGTCACCCTTGTTGGTGGACATACGATTGGTACTACAGCTTGCAAGTTTTTTAGGTACAGATTGTACAACTTCACTGCAAATGGTGCTGACTCTTCCATCAACCCTTTATTTCTTCGTCAACTAAGAGCATTGTGTCCGCAGAACGGAGGTGATTCAAACCGAGTAGCTTTTGATAAAGGTAGTGAAAACAGATTTGACACATCATACTTTGCCAATTTGAGAAATGGACGTGGAGTTCTACAGTCTGATCAAGCGCTTTGGAATGATCCTTCCACTAAGTTATTTGTACAGGGTTACTTGGCCTTTAATGGCTTGCTTTTCAAGGTGGAATTTGCAAAATCTATGGTGAAGATGAGCAACATTGAGTTGAAGACTGGGACCAATGGTGAAATTCGCAAGATATGTTCTGCCTTTAACTAG 966 0.4451 MEGRSLSAVTFLLLALVNVKVVHGQRTRVGFYARTCPRAESIVRSTVQSHVKSDPTLAAGLLRMHFHDCFVQGCDGSVLIAGVGTERTAFANLGLRGYEVIDDAKTQLEAACPGIVSCADILALAARDSVFLSGGLNWQVPTGRRDGHISQASDVTNLPAPFDSLDVQKQKFASKRLNTQDLVTLVGGHTIGTTACKFFRYRLYNFTANGADSSINPLFLRQLRALCPQNGGDSNRVAFDKGSENRFDTSYFANLRNGRGVLQSDQALWNDPSTKLFVQGYLAFNGLLFKVEFAKSMVKMSNIELKTGTNGEIRKICSAFN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2143 321 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 Gene3D Peroxidase, domain 2 159 300 - -
Pvu6g2143 321 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Pvu6g2143 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Pvu6g2143 321 CDD secretory_peroxidase 28 320 IPR033905 GO:0004601|GO:0042744
Pvu6g2143 321 SUPERFAMILY Heme-dependent peroxidases 28 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PANTHER PEROXIDASE 25-RELATED 9 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 Gene3D - 30 321 - -
Pvu6g2143 321 PANTHER PEROXIDASE 9 319 - -
Pvu6g2143 321 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu6g2143 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2143 Pvu-Chr6 30963881 30967441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2143 9 321 Peroxidase AT2G41480 60.377 1.05e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2143 K00430 - gmx:100783523 541.576