Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2137 ATGGCTTCGTCTCTTTCATTTCCAATTCCGTTCGCAATGGATTCGCTGTCGTGTGTGACGGTGACGCATATGGCACTTTCCAAACCTCTGAAGCACCATCGTCCTTTGGCCAGAGGCAAAGTCAGAGTTGGACCGCTTCATCGCCGCCTCAACTCCGTTGCGCCGTTCCGGTGCTCTTCCGCCGCGGACGACGCTGTCATCACTCTCCACGTTGGGGGAATGATGTGCGAAGGATGCGCTAATAGCGTCAAAAAGCTTTTAGAAAGCCGACCTCAAGTGTTATCTGCTCGTGTAAATTTGACATCCGAGTTAGCAACTGTTTCGCCTGCACCTGAAGAAAAAACGGCACCAAATTATCTAAAGCAATTAGGGGAGGAACTTGCTCAACATTTAACTACCCGTGGTTTCACTTCTACCCTTCAAGGAAAATTGGCTTGTCTTTCGCTAAAACCGGACAAGATTGTTCCACGCTTTGAATATACACTTGAAGGGTCCTCTAAGGTTCCAACTTTGTTGCAGTACTCAAGGTGTAAGGAAGACATGCACCAAAGGTTCCCATCACTGATAGTTATAGCGAGCAATATTTTGATGTTCTCTATGCCTGATATAGCTTTGGCTGAAACTTGTGAGGCTGGTAACTCTTTTTTCAATATGCCTATATTGCTAGCGGTAGCCCTCATTGGAGCCACGGTTGGAGGGTTGCTTGCTCGGCAAAGAAGAAATGAATTACAACGAGTAAACGAGCAATTAATCCAAATCAATGCAGCGCTAAGGAAGCAAGCCAAAATTGAGTCTTATGCTCCTAGCTTGAGTTATGCTCCCATTGGTGGTGGTAGGATACCTGATAATGAAATTATTGTTGACCCAAAGAAGCAAGAGCTAATTTCTAAGTTGAAAAATGGAAAGAACTTTCTAAGGAATCAACAATTGGATAAAGCATTCACAGAGTTTAAGAATGCACTTGAGCTTGCCCAGAATCTACGGGATCCTATCGAAGAGAAAAAGGCCGCTAGAGGTCTAGGAGCTTCATTGCAAAGACAAGGAAAATATCGAGATGCTATTAAATACCATTCCATGGTTTTGGCCATCTCTGAACGAGAAAGGGAGGACTCAGGGAGTACAGAGGCGTTTGGGGCAATTGCTGATTGTTACACTGAGCTTGGAGAACTTGAGAAAGCAGGTCAATTCTATGACAAGTATATTGCAAGATTGGAAAAGGACTAG 1224 0.4453 MASSLSFPIPFAMDSLSCVTVTHMALSKPLKHHRPLARGKVRVGPLHRRLNSVAPFRCSSAADDAVITLHVGGMMCEGCANSVKKLLESRPQVLSARVNLTSELATVSPAPEEKTAPNYLKQLGEELAQHLTTRGFTSTLQGKLACLSLKPDKIVPRFEYTLEGSSKVPTLLQYSRCKEDMHQRFPSLIVIASNILMFSMPDIALAETCEAGNSFFNMPILLAVALIGATVGGLLARQRRNELQRVNEQLIQINAALRKQAKIESYAPSLSYAPIGGGRIPDNEIIVDPKKQELISKLKNGKNFLRNQQLDKAFTEFKNALELAQNLRDPIEEKKAARGLGASLQRQGKYRDAIKYHSMVLAISEREREDSGSTEAFGAIADCYTELGELEKAGQFYDKYIARLEKD* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2137 407 PANTHER PROTEIN FLUORESCENT IN BLUE LIGHT, CHLOROPLASTIC 172 407 - -
Pvu6g2137 407 ProSiteProfiles Heavy-metal-associated domain profile. 66 140 IPR006121 GO:0046872
Pvu6g2137 407 SUPERFAMILY TPR-like 301 402 IPR011990 GO:0005515
Pvu6g2137 407 Coils Coil 236 260 - -
Pvu6g2137 407 Pfam Tetratricopeptide repeat 337 406 - -
Pvu6g2137 407 SUPERFAMILY HMA, heavy metal-associated domain 64 117 IPR036163 GO:0046872
Pvu6g2137 407 Gene3D Tetratricopeptide repeat domain 289 407 IPR011990 GO:0005515
Pvu6g2137 407 Pfam Heavy-metal-associated domain 68 115 IPR006121 GO:0046872
Pvu6g2137 407 ProSitePatterns Heavy-metal-associated domain. 71 100 IPR017969 GO:0046872
Pvu6g2137 407 CDD HMA 68 124 IPR006121 GO:0046872
Pvu6g2137 407 Gene3D - 66 143 - -
Pvu6g2137 407 PANTHER PROTEIN FLUORESCENT IN BLUE LIGHT, CHLOROPLASTIC 172 407 IPR044243 GO:0015995|GO:0033014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2137 Pvu-Chr6 30913685 30919020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2137 66 139 Primary Pumps ATPases AT4G33520 62.162 1.41e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2137 - - vra:106775694 722.235