Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2136 ATGGCGGAGGGAGCTGCTTATGGATTGCGTCGTCCATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGGTGGTTGCGACCTGCAGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCAAATCACTTCAGAACCTCATAACAGGCCACCAAGTGGCTCACTTTTTCTATTTGATAGAAAGGTTTTGAGATACTTCAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGACGGAAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTTGGAAGTGTTGATGTGTTGCATTGCTACTATGCCCATGGAGAAGATAATGAAAATTTTCAAAGGCGAAGCTACTGGATGCTTGAACCGGATATGATGCACATAGTATTTGTCCATTACTTGGAAGTTAAGGGTAACAAAAATATTGTAGTGAATACCGAAGGTGAGGATTCCCAAAAGGTTACTTCACTTAGCACGGATTCTGTCAGCCCATCAAGCAGTTTGATGTCTTTACGTGAAGATGCTGATTCTGAGGATATCCACCAAATTAGTTCTGGGTTGCGCCCATTACATGAGTCACGACATATGGGGAATGGTCCATTGACAGAAAAGATTGATGGTGGTGTGAACAGTTCATATCATATGCATTCCTTTTCAGGTGATCATGGACAGTCATCAATTTCTGGAACAGATTATATCCCAGTTGTTCATGAGGATAAATTTAGAGGAAATGACACTACGTATTTTGATGGTGAGAAAACACATGGCGTGGCACCATGGGACACTGTCTTGGAAAGCACTGCCAATTTGCATAATGATCCTTCTCTTGCATCATTTTCTTCAATGCCCTCTAGTTCAATGGGTAGTGTCCTTGAACAAGAACATACCATTTTTGGTGACCTTTTATCAGGCAAAAGAGTTCTCACCGTGGAAGCAGAGAGCTCTCACTCTTTCCAATCGAGTTGGCAGATTCCTTTTGAAGACAGTTCGGGAAATATGCCAATGTCAACCCTAACCCCCCAATCATTTGGTCTGCAATTTGGATCTGATTATGGCACCAGTTCACTAGGGTATGAAACTCGTAATACAAGTTCTGAAATTGCTCCGATCCTGTACAGTTTTAATGGCGATCCAAAAGAGCAGCTCATGCAGAAAAACTATCCACAAGAGCATGCAGATGGACAATCTCAACATTCTCTAAAATCCAATTCTGCAATTAAAGTTTCTGATGAAGAATCTGTCAACTATAGCTCAAATGTGAAACGCACACTATTGGACAAAGATGAGAGCCTGAAGAAGGTTGATAGTTTCTCTCGGTGGGTAACTAAAGAACTTGGAGAGGTGGCTGATTTGAATATGCAGTCCACACCTGGTATTTCTTGGAGTACAGATGAATGCCAGCATGTGATAGATGATAGCTCATTGAGTCCATCTCTCTCTCAGGACCAACTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATGCTGAGTTAAATATTGAGGTGTTGATTATTGGATCATTTTTTAAGAGTCAATCGGAGGTGACAACATGTAACTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCAGCTGAGGTTTTAGCTGATGGAATTTTGTGTTGTCAAGCTCCTCGTCATAAAGTTGGACGGGTCCCATTCTATGTAACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGCGGGAATTTGATTTCAGAAAAGACTTTGCTAGAAATGTAGATTTTGCAGAATTTTTTGGCAGTTCAACTGAAATGCAGCTTCATAGCCGACTGGAGAATTTTCTTACTTTAAAGCCAGTGAACCCTTCAAACCATTCTTTTGAGGGTGATATGGAGAAAAGGAATTTAATTTTCAAGCTTATTTCACTGAGAGAGGAAGAGGAATATTCCATTAAGGATGAACCAACTACAGAATTGGATATATCCAAACACGGGGTGAGGGAGCATCTTTTTCACAGGCAGATTAAAGAGAAGCTGTACTCATGGCTTCTTCACAAAGTAACTGAGAGTGGTAAAGGGCCCAATGTATTAGACAAGGATGGCCAAGGTGTGATACACTTAGCAGCTGTTCTTGGTTATGATTGGGCCATAAATCCAATTATATCTTCTGGAGTTAATATCAACTTCCGAGATGTGAATGGATGGGCTGCTCTTCACTGGGCTGCATTCTGTGGCAGAGAGCGGACAGTTGCTTTCCTGGTGTCCATGGGAGCAGATTGTGGAGCACGGACAGATCCATCTCCTGCATTTCTGTCTGGTAGAGAAGCTGCAGATCTTGCCTCTGAAAACGGGCACAAAGGAATCTCTGGTTTTCTTGCTGAGTGTTCATTAACTCACAGACTTGAAACCATCACAATGGATGATCAAAAAGGTGGTCGACAAGAAATTTCAGGAATGAAAGGGGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTGCTCTGTGGTGATATGCCAGATACCCTCTGTCTCAAGGATTCGCTTATTGCTGTGCGTAATGCAACACAAGCCGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAACTCAGTATGAAGGGGATGATGAGCTTGGATTGTTAGATCAGCAAGCCCTATCTCTTCTAGCTTCTAGGGCTTGCAAATCTGGACAACGAAATGGTTTAGCCAATGCTGCCGCAATACACATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATGATTCGCCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTACGGAAACAGTATAAACCAATCATCTGGTCTGTGGGAATCCTAGAGAAGATCATATTACGTTGGAGGCGCAAGGGTAGTGGTTTACGTGGATTTCGACCAGACACGCTTAATAAAGTCCCCAGTCAACACAATGATTCTCCGAGAGAAGATGAAGATGAAGATGATTATGATTTTCTCAAGGAGGGACGGAAACAAAAGGAAGAAAATATCAAAAAGGCATTATCAAGGGTGAAGTCCATGGCTCAGTATCCAGAGGCACGCGCCCAATACCGGCGTCTGCTAAATGTTGTCGAGGACTTCCGTCAACCCAAGGGAACTAACGAGGATTTGACCAGTTCTGAAGAAGGGATGGTTGATGGTGTGGAGGATTGGATTGATATTGATATGCTTTTAGACGATGACAATTTCATTCCTATAGCATTTAACTGA 3231 0.4181 MAEGAAYGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEDNENFQRRSYWMLEPDMMHIVFVHYLEVKGNKNIVVNTEGEDSQKVTSLSTDSVSPSSSLMSLREDADSEDIHQISSGLRPLHESRHMGNGPLTEKIDGGVNSSYHMHSFSGDHGQSSISGTDYIPVVHEDKFRGNDTTYFDGEKTHGVAPWDTVLESTANLHNDPSLASFSSMPSSSMGSVLEQEHTIFGDLLSGKRVLTVEAESSHSFQSSWQIPFEDSSGNMPMSTLTPQSFGLQFGSDYGTSSLGYETRNTSSEIAPILYSFNGDPKEQLMQKNYPQEHADGQSQHSLKSNSAIKVSDEESVNYSSNVKRTLLDKDESLKKVDSFSRWVTKELGEVADLNMQSTPGISWSTDECQHVIDDSSLSPSLSQDQLFSINDFSPKWAYAELNIEVLIIGSFFKSQSEVTTCNWSCMFGEVEVPAEVLADGILCCQAPRHKVGRVPFYVTCSNRLACSEVREFDFRKDFARNVDFAEFFGSSTEMQLHSRLENFLTLKPVNPSNHSFEGDMEKRNLIFKLISLREEEEYSIKDEPTTELDISKHGVREHLFHRQIKEKLYSWLLHKVTESGKGPNVLDKDGQGVIHLAAVLGYDWAINPIISSGVNINFRDVNGWAALHWAAFCGRERTVAFLVSMGADCGARTDPSPAFLSGREAADLASENGHKGISGFLAECSLTHRLETITMDDQKGGRQEISGMKGVQTVSERTATPVLCGDMPDTLCLKDSLIAVRNATQAADRIHQVFRMQSFQRKQLTQYEGDDELGLLDQQALSLLASRACKSGQRNGLANAAAIHIQKKFRGWKKRKEFLMIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKIILRWRRKGSGLRGFRPDTLNKVPSQHNDSPREDEDEDDYDFLKEGRKQKEENIKKALSRVKSMAQYPEARAQYRRLLNVVEDFRQPKGTNEDLTSSEEGMVDGVEDWIDIDMLLDDDNFIPIAFN* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2136 1076 Coils Coil 990 1010 - -
Pvu6g2136 1076 ProSiteProfiles Ankyrin repeat region circular profile. 719 745 - -
Pvu6g2136 1076 ProSiteProfiles IQ motif profile. 918 942 IPR000048 GO:0005515
Pvu6g2136 1076 ProSiteProfiles Ankyrin repeat profile. 686 718 IPR002110 GO:0005515
Pvu6g2136 1076 MobiDBLite consensus disorder prediction 148 174 - -
Pvu6g2136 1076 Pfam IPT/TIG domain 486 560 IPR002909 -
Pvu6g2136 1076 SMART iq_5 917 939 IPR000048 GO:0005515
Pvu6g2136 1076 SMART iq_5 894 916 IPR000048 GO:0005515
Pvu6g2136 1076 Gene3D Immunoglobulins 479 575 IPR013783 -
Pvu6g2136 1076 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Pvu6g2136 1076 ProSiteProfiles IQ motif profile. 895 924 IPR000048 GO:0005515
Pvu6g2136 1076 MobiDBLite consensus disorder prediction 966 989 - -
Pvu6g2136 1076 SMART CG_1_2 18 136 IPR005559 GO:0003677
Pvu6g2136 1076 MobiDBLite consensus disorder prediction 148 170 - -
Pvu6g2136 1076 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1076 - -
Pvu6g2136 1076 Gene3D - 895 941 - -
Pvu6g2136 1076 ProSiteProfiles Ankyrin repeat profile. 719 751 IPR002110 GO:0005515
Pvu6g2136 1076 SUPERFAMILY E set domains 486 571 IPR014756 -
Pvu6g2136 1076 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Pvu6g2136 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 884 945 IPR027417 -
Pvu6g2136 1076 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1076 - -
Pvu6g2136 1076 SMART ANK_2a 686 715 IPR002110 GO:0005515
Pvu6g2136 1076 SMART ANK_2a 719 748 IPR002110 GO:0005515
Pvu6g2136 1076 SUPERFAMILY Ankyrin repeat 665 780 IPR036770 -
Pvu6g2136 1076 Pfam IQ calmodulin-binding motif 897 915 IPR000048 GO:0005515
Pvu6g2136 1076 Pfam IQ calmodulin-binding motif 920 939 IPR000048 GO:0005515
Pvu6g2136 1076 Gene3D - 655 789 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2136 Pvu-Chr6 30900851 30911858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2136 1 1036 CAMTA Transcription Factor Family AT5G64220 53.321 0.0 1054
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pvu6g2136 CG-1 8.7e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2136 K21596 - gmx:100818124 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2151 2 36924678 36935363 Pvu6g2136 6 30900851 30911858 PCT