Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2135 ATGGCTTGTTTGTGTTGCTTCAATCAGGTGGTTGGAGGACGCTCTTCATGTAGCTCTGGCAAGGGCAGGAGCCACCTGTGCCCTGTTAAGTATGGTTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAATTTGTCAAGTGCGGAGGGAAAGAGTTAGGACTTTTTGCTATATACGACGGACACTTGGGAGAGAGTGTGCCCACCTATTTACAAAAGCATCTTTTTTCCAATATCTTGAAGGAGGAGGACTTCTGGACTGATCCTGCCCGTTCTATCATCAAAGCTTATGAGTCAACAGATCAGGCCATTCTTTCTCACAGTTCTGATTTGGGGCGAGGAGGATCTACTGCAGTGACTGCAATTCTTATTAATAATCAGAAGTTAATAGTCGCAAATGTTGGTGATTCACGAGCAGTTCTGTCAAGGAAGGGGGAGGCCATTCAGGTGACTATTGATCACGAGCCAAATACTGAGAGGGGCCATATCGAGAACAAAGGGGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAATCTAAAATCACACTTACGATCTGATCCTGATGTACATCAATCTGATATTAACCCAGATGCTGAGCTTTTGATACTTGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAAGCAGTTGATATTGCAAGAAGGATAAAAGATCCACAAAAGGCAGCCAAAAAGCTGGTTGCAGAGGCATTGGACAAAGACAGCAAGGATGATATTTCATGCATTGTAGTTCGTTTCAAGGGGTGA 840 0.4417 MACLCCFNQVVGGRSSCSSGKGRSHLCPVKYGFSLVKGKANHPMEDYHVAKFVKCGGKELGLFAIYDGHLGESVPTYLQKHLFSNILKEEDFWTDPARSIIKAYESTDQAILSHSSDLGRGGSTAVTAILINNQKLIVANVGDSRAVLSRKGEAIQVTIDHEPNTERGHIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVHQSDINPDAELLILASDGLWKVMANQEAVDIARRIKDPQKAAKKLVAEALDKDSKDDISCIVVRFKG* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2135 279 PANTHER PROTEIN PHOSPHATASE 2C 6 278 IPR015655 GO:0004722|GO:0006470
Pvu6g2135 279 SUPERFAMILY PP2C-like 23 278 IPR036457 -
Pvu6g2135 279 CDD PP2Cc 29 277 IPR001932 -
Pvu6g2135 279 Gene3D - 25 279 IPR036457 -
Pvu6g2135 279 SMART PP2C_SIG_2 41 277 IPR001932 -
Pvu6g2135 279 ProSiteProfiles PPM-type phosphatase domain profile. 30 277 IPR001932 -
Pvu6g2135 279 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 278 - -
Pvu6g2135 279 SMART PP2C_4 26 275 IPR001932 -
Pvu6g2135 279 Pfam Protein phosphatase 2C 39 270 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2135 Pvu-Chr6 30888840 30894097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2135 1 278 PP2C-type Phosphatase Gene Family AT1G22280 68.990 1.85e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2135 K17506 - gmx:100787659 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2155 2 36977911 36986275 Pvu6g2135 6 30888840 30894097 PCT