Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2118 ATGGAAGAGAGAAAGAGAGAGAAGGAGGTTGTGCCATTGGATATTGTGATGAATATTTTGAAGAGAGTTCCAGTGAAATCACTAATGCGATTTAAAGAGTGGTTAAATCTACCAACAAACCCTTACTTCATCAAACAGCAGCTGCAACACTCCAACGCATCCACCGCCAACCGCCACCTATCTCCTTCTCCGTCTGCCTCGTCGGACCCCACAACAACCTCATCCACCAATCTCATCTCTCCCACATCGCTTTGCTCGACACCGGTTCCCACCCCAACCGTTATGCCCTTCCACGACGTTGGATTCGGGTTCAGTTCCCTTACCGATGATTACAAGATCGTGCGAATCTCCATGTGCGTCATCTTCAAACAACCTAAGGTTGATCGAGCCGAGGTATATTCGTTAACCTCCGGCTCGTGGAGGGAAATTAACGCCGTCAAGTTGCATAATTTGGGTCTTGTCTCTAGATCAGTAGCCATCACTGGAACTATATTTTGGCTTGCCTCTAGGACTTTCAGTTCCACCCATTATGAATTTGTGGTTTCATTTGACATTGGAAGGGAATTGTTTACACTGATGATTGGTCCTCAGATGCCATCTTCGCCCTCTCCTACCTTCAACAACTACGAGCTTGTGGTTTGCAACGATGAACTGGCCATGTTTTGCAACTGCATTGCTAGGAACTTCGTGTCTTGTTCATTTGATTTGTGGGTGTTGAAAGATTTTAATTGCGATTATGATGATGATAGACGTGATGGTGGTGGAGAGAGTTGGGTGAAGATGTACAGTGTGGGGCCATTTTCCGGCCTTGTGTATCCTTTAAGCCTTTGGAAAGATGAAATTGTGTGCCGGGAACGGTTGAAGATACTGAAGCAACTGCAACCTGATAGAGATGAGTTTTGTTATGTGCCCTTCACCTATATTGAAAGTCTTATTCCAGTTTGA 945 0.4529 MEERKREKEVVPLDIVMNILKRVPVKSLMRFKEWLNLPTNPYFIKQQLQHSNASTANRHLSPSPSASSDPTTTSSTNLISPTSLCSTPVPTPTVMPFHDVGFGFSSLTDDYKIVRISMCVIFKQPKVDRAEVYSLTSGSWREINAVKLHNLGLVSRSVAITGTIFWLASRTFSSTHYEFVVSFDIGRELFTLMIGPQMPSSPSPTFNNYELVVCNDELAMFCNCIARNFVSCSFDLWVLKDFNCDYDDDRRDGGGESWVKMYSVGPFSGLVYPLSLWKDEIVCRERLKILKQLQPDRDEFCYVPFTYIESLIPV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2118 314 Pfam F-box associated domain 158 242 IPR013187 -
Pvu6g2118 314 SUPERFAMILY F-box domain 10 56 IPR036047 GO:0005515
Pvu6g2118 314 PANTHER BNAA05G37150D PROTEIN-RELATED 1 248 - -
Pvu6g2118 314 PANTHER BNAA05G37150D PROTEIN 1 248 - -
Pvu6g2118 314 TIGRFAM F_box_assoc_1: F-box protein interaction domain 88 269 IPR017451 -
Pvu6g2118 314 MobiDBLite consensus disorder prediction 53 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2118 Pvu-Chr6 30779777 30780871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2118 131 238 Carbohydrate Esterase AT1G25141 27.523 7.34e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2118 - - pvu:PHAVU_006G204600g 611.683