Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2106 ATGGTTAAGGCTCATTGGTCTTGGCCTAACCCACAGCATGTGGCTTGGCCATCACCTTACTTAAATAGCCCCTGCACCTTAGCAGAGCCCAGTTCGCTGGTTCATTCAACATACATGAACTCTAGCACATGCATATTTCCGGGGTTCACAGCTCCTGCTATCCCAAATTTGAAGAGTGAGCTAACCAATGAAGTGCAGGGATTCCTTCAGCATCCCAATGAACCATGTTTAAACGAAACACATAGTGGAGAGGCTGTGCAAGATGCATCTTTGCAGAAGAAGCTGCTTGTTTTTGACCACTCTGGTAGTAAGACAAGGTTGCTTTATAGTCCTGTCTTCCCTTTTGTCCAGAGTCCAATTGTTACTGCTACCCAATTCACTCAAGTTTATGACGTAAAAGAGGAAGCACGAGCAACTAATATAGGCCTAAAGCATTGGCCCATATACACTTCACCAGAAGAGACTGGGAAGGATCATATAGATAATGAAGAAAGTGAAATGCACGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATTCTGATGATGATAGTGATGATGAGGTAACAAGTACAGGTCATTCTCCGTTGGTTACTGAAAAAATGTGTGTGATTCAAGAACAGTTTGTGGATATGAAGGAGGAAGTTGCTAGCACTGATTGGCCAAACAAAAGGCAGAAGTTAATTGATGGTGGATTCAATAGATTGCCACCACTTGTGGAGAGTGCTAGTTCGGAAAGGCTAAATAAAAAGTGTGACTATGCCAGTGATGCTGAATCAAACTATTCTAGTAGTGTTGAGGTGTATGCTACCAGGCAAACTAAGAATAAATCAACAGATGTTGATATTGAATTGAAAAAGGATAAAATCCGTAAATTGTTAAGAGTTCTTGAGAACTTTATTCCTGGAGCAAAAGGAAAGCAACCCCTATTAGTCATCGATGGTACTATTGAGTACTTGGAATCTCTGATGGCCCAAACTGGTAGACTGAAATATTACTAA 1008 0.4087 MVKAHWSWPNPQHVAWPSPYLNSPCTLAEPSSLVHSTYMNSSTCIFPGFTAPAIPNLKSELTNEVQGFLQHPNEPCLNETHSGEAVQDASLQKKLLVFDHSGSKTRLLYSPVFPFVQSPIVTATQFTQVYDVKEEARATNIGLKHWPIYTSPEETGKDHIDNEESEMHEDTEEINALLYSDDSDDDSDDEVTSTGHSPLVTEKMCVIQEQFVDMKEEVASTDWPNKRQKLIDGGFNRLPPLVESASSERLNKKCDYASDAESNYSSSVEVYATRQTKNKSTDVDIELKKDKIRKLLRVLENFIPGAKGKQPLLVIDGTIEYLESLMAQTGRLKYY* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2106 335 MobiDBLite consensus disorder prediction 150 171 - -
Pvu6g2106 335 PANTHER TRANSCRIPTION FACTOR BHLH145 7 333 IPR037546 -
Pvu6g2106 335 PANTHER TRANSCRIPTION FACTOR SAC51 7 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2106 Pvu-Chr6 30710251 30713858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2106 90 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G64340 39.754 1.94e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2106 - - gmx:100778385 494.967