Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2105 ATGGGAGTGGAGAAGCAATTGTTGAGGCCTGGCACCGGTCCCAAGCCAAATCCTGGTCAAAACGTCACCGTTCACTGCACTGGTTTTGGGAAGAACGGCGACCTAACTCAGAAATTTTGGAGCACAAAGGATCCTGGCCAAACCCCTTTCTCCTTCAAGATCGGCCAAGGTTCTGTCATCAAAGGATGGGATGAAGGTGTGCTTGGCATGCAAATTGGTGAAGTTGCTCGTCTCCGGTGCACTCCTGATTATGCTTATGGTGCTGGTGGCTTTCCTGCTTGGGGAATACAACCCAACTCTGTCTTGGAATTTGAAATCGAAGTCTTAAGTGCGAATTGA 339 0.4926 MGVEKQLLRPGTGPKPNPGQNVTVHCTGFGKNGDLTQKFWSTKDPGQTPFSFKIGQGSVIKGWDEGVLGMQIGEVARLRCTPDYAYGAGGFPAWGIQPNSVLEFEIEVLSAN* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2105 112 Gene3D - 1 112 IPR046357 GO:0003755
Pvu6g2105 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Pvu6g2105 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 111 - -
Pvu6g2105 112 MobiDBLite consensus disorder prediction 1 21 - -
Pvu6g2105 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 109 IPR001179 GO:0003755
Pvu6g2105 112 PANTHER PEPTIDYLPROLYL ISOMERASE 1 111 - -
Pvu6g2105 112 SUPERFAMILY FKBP-like 2 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2105 Pvu-Chr6 30704175 30705898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2105 2 110 Calmodulin-binding Proteins AT5G48570 41.818 1.13e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2105 K01802 - gmx:100305505 225.713