Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2097 ATGGAGGGCTACGGCGGAGGGAGTAGAGGGGAGGCGGAGCGCTGGCTCTACACGGCCAACAAGGTTTTGAGTGCACGTGACTTGCACGGGGCCCGCTCATTTGCGATACGGGCCCGAGAGTCCGACCCGAGATACGAACCCACCGAGCTTCTTTTGACGGTTATCGATACCCTCATGGCCGGCGAGGCCCGGATCAACGACCACCTCGACTGCTACGCCATTCTCCAAGTCCTCCGTTACACTCAGAACATCGACTATATCGCCGCCCAGTACCGCCGTCTCGCCGCCCAGCTCGACCCTCACCACAACCCGTTCGCCTTCGCCGCTCATGCCTTCACTCTCGTCAACGACGCCTGGTCCGTACTTTGCAACTCTGCCAAGAAAGCCCTCTACGACAACCAACTCAGGCTCCTCACTCAACCCCCTCCTCCTCCTCCTCCTCCTCCACCGCCGCCGCCGCAACCTCCCGCTTCTGCGGTTACGTTCTTCCCGATTCAACCTCCGCAACCGAACCTAAACCCGAAGCCAACCCCGTACCAAGTTCCTCAGCGGGAAAAAAGCCCCGGGCCTTGGGTAGAGGTGGAGGTGCCGAGTCGGGAGGACAATGCGAGCGAGTTGACTCGAGCGAGTGAGACCGGGAGCGAAGGGGAGAGTTTCTGGACCGCGTGCCCTTATTGTTGCGTTATGTACGAGTATCCGAAGGTGTACGTGGACTGTACGCTGCGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGGTACGGTCGCCGCCGGACGATGGTGTTGGTTCGTTTTCCGGTTGGGGTTTTTTCCCTGTGGGGTTTTCTGGGGATTTTAGAGACATTAACGGTTCTTCTTCCAATTGGAACCCTTTTTCCCCTTTGGTTCCCTGCGCTGTCAAAGGGGAGGAGATGCAGAGTAGGAAGCACCAGAAGGGGCCTTATGTTTTCTACGACGATGACGCATCTGCGGAGTTCGCGGAGGGTTCCGACACGACGGAGGATGATTCCGGCGATGATGATTGGCGCGGCGGGAAACAGAAGGGGATGGTGACAAAGAAGAGGAGGAGAAAGAGGGGGAGGAAGAGAAGCAATGGCGGTGGTGATGATGTTAGGAGGGAACCGATTGAGAGGCCTAGGAGAGGGGTTCATAATCATAGTGGTGGTTCTGGGAATGTTAATGGGAATGTGGAGAACGGTGAGGTTGCGGATGGTGACGGTGTTGCGGCGGTGCTAGATTCTAGTAAGAAGGGTGCATTGGGTGGTTCGAGGAGGAGGGGTGAGAGGAACTTGGGGAAGTTGGATTTGAATGTAGAGTTCAGCAATGAGGTGGAGGAGCCTTTGCATGGAGTGGATGAAGGGAATGAAAACGGAACTGGGAATGCTGAGGACAATATTGAAGGGATTGGGTTTTTTGAGGGGCTTGACGAGTTCCTTAGTAGCTTGCCCATTCTCAATGTTGTTGCAGATGACAAGGTTAAGGGTCATTAG 1494 0.5616 MEGYGGGSRGEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTELLLTVIDTLMAGEARINDHLDCYAILQVLRYTQNIDYIAAQYRRLAAQLDPHHNPFAFAAHAFTLVNDAWSVLCNSAKKALYDNQLRLLTQPPPPPPPPPPPPPQPPASAVTFFPIQPPQPNLNPKPTPYQVPQREKSPGPWVEVEVPSREDNASELTRASETGSEGESFWTACPYCCVMYEYPKVYVDCTLRCQSCRRGFHAVVVRSPPDDGVGSFSGWGFFPVGFSGDFRDINGSSSNWNPFSPLVPCAVKGEEMQSRKHQKGPYVFYDDDASAEFAEGSDTTEDDSGDDDWRGGKQKGMVTKKRRRKRGRKRSNGGGDDVRREPIERPRRGVHNHSGGSGNVNGNVENGEVADGDGVAAVLDSSKKGALGGSRRRGERNLGKLDLNVEFSNEVEEPLHGVDEGNENGTGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2097 497 CDD DnaJ 70 124 IPR001623 -
Pvu6g2097 497 MobiDBLite consensus disorder prediction 136 211 - -
Pvu6g2097 497 Pfam DnaJ domain 70 132 IPR001623 -
Pvu6g2097 497 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Pvu6g2097 497 SMART dnaj_3 69 127 IPR001623 -
Pvu6g2097 497 MobiDBLite consensus disorder prediction 138 183 - -
Pvu6g2097 497 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Pvu6g2097 497 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 5 497 - -
Pvu6g2097 497 SUPERFAMILY Chaperone J-domain 64 136 IPR036869 -
Pvu6g2097 497 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 497 - -
Pvu6g2097 497 MobiDBLite consensus disorder prediction 328 403 - -
Pvu6g2097 497 MobiDBLite consensus disorder prediction 364 385 - -
Pvu6g2097 497 Gene3D DnaJ domain 59 140 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2097 Pvu-Chr6 30665335 30667454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2097 11 496 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 38.477 3.82e-91 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2097 - - gmx:100778926 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2183 2 37438768 37440210 Pvu6g2097 6 30665335 30667454 PCT