Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2080 ATGTTGGTCTCCATGCAACCAACAATCTATTGTGCTATGCAGTGGGAATGGTGTTCTTACTTCTTCTTATGGTTGGTTTTGCAAACCCACTTTCATTTCATCACGAGGGATTTGAGAATAATGATGCCAAGGTTGAAGGAGATGCTACTTTGTCAGAGTCAGAAATCCAACTCACTAAAACCACAAGATCCAGAGCTCCCATTTTCCCATCAAATACAAGAAGGAGGTGGTCTTGGTCTTCTGGATGGTAACCAATTGTTGGATTCAACTAAATATCCATTTGTAGCAGTGGAGTTTGACACTCATACAAATTCATGGGATCCACCTGGCCCTCATGTAGGTATAAATTTCAACTCTATGAGATCTAACAAAACTGTTCCATGGGCCGTTGATATTAGGGAAATGAAAGTTTATTATTGTGTAATTGAGTACAATGCAACTACTCACAGTTTAAATGTTTCTTTCACTGGAAACTTTTTCAATGTCGCCAAGCCAGTAAAAAGTTATGTCTCATGCAATGTTGACCTGAGATATTACCTACCAGAGTGGGTTATATTTGGCTTCTCAGCTGCTACAGGATTTATGTTTGAGTTGAACACACTGCACTCATGGTCCTTCCATTCAACTTCACAAATTAATGAGAATGTGTCAAATAAGATACCTCCAATTCCAGCCTCACCAATCCCAAATCCTAGTCCTTCACCAATCCCAAATCCTAGTCCTTCACCAAATTCCACTGATAATATTAGCTCTAGACAAGAGGGAAACAAAGGTTTATTGATGGGACTAAAAGTTGGGGTAGGCATAGCTGCAAGTTTCCTTATTGTAGGGTTGGTTTGTATTTTAATGTGGAGGAGGATGGCTAAAGGGAAAAAAGAAGATTCAATTCTTGATCTGGGCATGGATGATGAATTCCAAAAGGTCACTGGATCCAAAAGATTCTGCTATAAAGAATTGGCAAGTGCAACAAATAACTTTGCAGAGTCACAAAAGATTGGACAGGGTGGTTTTGGTGGTGTGTATAAAGGCCATTTGAAGGAATTGAACTCCAATGTTGCTATAAAGAGGATATCAAGTGAATCTAGACAAGGAGCAAAGGAATATGCAAGTGAAGTTAAGATCATCAGCCAACTAAGGCACAGGAATTTGGTACAATTAATTGGTTGGTGCCACATGAAGAAAGATCTCCTCCTTATATACGAGTTCATGCAAAAGGGTAGCTTAGATTCCCACCTATATGGTGGAAAAAGCATCTTGACATGCCAGATGAGGTACAACATTGCCATGGACTTGGCTCTGGCAGTGTTGTACCTTCATGAAGAATGGGACCAGTGTGTGCTTCATAGGGACATTAAATCCAGCAACATTATGTTGGATTCAAGTTTCAATGCTAAGCTTGGGGATTTTGGTTTAGCTAGGCTGGTTGATCATGAGAAAGGATTCCAAACCACAATTCTAGCAGGGACAAGAGGCTACATAGCCCCTGAATACTTCACTACAGGGAAGGCTAGGAAGGAATCTGATATATACAGTCTAGGGGTTGTTTTACTGGAATTAGCCACTGGAAGAAAACCAGTTGATCTCAATGCCAAGGAAGGTCAAATTACCATATTTGAGTGGGTTTGGGAGCTCTATAAATTGGGAAAGTTACTTGAAGTGGTAGACACAAAACTTGGGGGAGCATTTGATGAGGAACAAATGAAACATTTGGTGATTGCTGGCCTTTGGTGTGCCAATCCAGATTATACTTCTAGACCATCTGTAAGGCAATTGATTCAAGTGCTGAAGTTTGAAGCTCCTTTACCAGTTCTCCCACAAAAATTGCCTGAGCCAAATTATGATTCTCCAATTATGTGTACAATATTTGCTTCTATTTCTTCTCCCCTCTCTGACTACATGTTAGAACCAAATACAATGTAA 1920 0.3995 MLVSMQPTIYCAMQWEWCSYFFLWLVLQTHFHFITRDLRIMMPRLKEMLLCQSQKSNSLKPQDPELPFSHQIQEGGGLGLLDGNQLLDSTKYPFVAVEFDTHTNSWDPPGPHVGINFNSMRSNKTVPWAVDIREMKVYYCVIEYNATTHSLNVSFTGNFFNVAKPVKSYVSCNVDLRYYLPEWVIFGFSAATGFMFELNTLHSWSFHSTSQINENVSNKIPPIPASPIPNPSPSPIPNPSPSPNSTDNISSRQEGNKGLLMGLKVGVGIAASFLIVGLVCILMWRRMAKGKKEDSILDLGMDDEFQKVTGSKRFCYKELASATNNFAESQKIGQGGFGGVYKGHLKELNSNVAIKRISSESRQGAKEYASEVKIISQLRHRNLVQLIGWCHMKKDLLLIYEFMQKGSLDSHLYGGKSILTCQMRYNIAMDLALAVLYLHEEWDQCVLHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGFQTTILAGTRGYIAPEYFTTGKARKESDIYSLGVVLLELATGRKPVDLNAKEGQITIFEWVWELYKLGKLLEVVDTKLGGAFDEEQMKHLVIAGLWCANPDYTSRPSVRQLIQVLKFEAPLPVLPQKLPEPNYDSPIMCTIFASISSPLSDYMLEPNTM* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2080 639 Gene3D - 59 223 - -
Pvu6g2080 639 Gene3D Phosphorylase Kinase; domain 1 311 402 - -
Pvu6g2080 639 ProSitePatterns Legume lectins alpha-chain signature. 180 189 IPR000985 -
Pvu6g2080 639 CDD STKc_IRAK 332 596 - -
Pvu6g2080 639 Pfam Protein kinase domain 327 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2080 639 SUPERFAMILY Concanavalin A-like lectins/glucanases 74 216 IPR013320 -
Pvu6g2080 639 MobiDBLite consensus disorder prediction 220 253 - -
Pvu6g2080 639 Gene3D Transferase(Phosphotransferase) domain 1 403 615 - -
Pvu6g2080 639 PANTHER LECTIN RECEPTOR KINASE 62 631 - -
Pvu6g2080 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pvu6g2080 639 PANTHER - 62 631 - -
Pvu6g2080 639 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Pvu6g2080 639 ProSiteProfiles Protein kinase domain profile. 326 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2080 639 SUPERFAMILY Protein kinase-like (PK-like) 310 622 IPR011009 -
Pvu6g2080 639 SMART serkin_6 326 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2080 639 Pfam Legume lectin domain 71 216 IPR001220 GO:0030246
Pvu6g2080 639 CDD lectin_legume_LecRK_Arcelin_ConA 88 209 IPR001220 GO:0030246
Pvu6g2080 639 MobiDBLite consensus disorder prediction 222 242 - -
Pvu6g2080 639 ProSitePatterns Legume lectins beta-chain signature. 95 101 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2080 Pvu-Chr6 30532961 30535141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2080 59 613 Receptor kinase-like Gene Family AT5G10530 45.406 6.77e-156 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu6g2080 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2080 - - gmx:100814713 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2080 6 30532961 30535141 Pvu6g2080 6 30532961 30535141 ECH
Pvu2g2209 2 37692953 37695040 Pvu6g2080 6 30532961 30535141 PCT
Pvu6g2080 6 30532961 30535141 Pvu2g2213 2 37718850 37720793 PCT