Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2064 ATGACTACTATAGTGTCTCTGCCAAGATCCTGTCTCTCTCAACACAAAACAAGCCATAATGGAAGCTTAACAAGGATCGCACTCTCACAGAGAATTCTAAAGAAGAAGAAGAAAAAGAAGATAAAGATGGAGAATTATTCATACCAATCATACCCTGAGTCTGGCGACTCCTCTCCACGCTCCAGAGAGATCGACTTTGACAACCCTCCTGCTCCATGGGACGAACAACAACAACAAAATTACAAGGTAAAGTTCATGTGCAGCTACGCCGGGAAGATCCACCCACGCTCCCACGACAACCAACTCTCATACGTCGGCGGCGAGACCAAGATCCTTGCCGTCGACCGCTCCATAAAGTTTTCCGTCCTGCTGGCCAAGCTCTCCGCCCTCTGCGAGCTGCCGCCACAAGAAAGCAACGGCAGCAGCCTCACCTTCAAGTACCAGCTCCCGGGCGAAGACCTCGACGCTCTCATCTCCGTCACCAACGACGACGACCTCGACCACATGATGCACGAGTACGATCGCCTCTACCGCGCTTCCGCTAGACCCGCCCGCATGCGATTATTCCTCTTTGTCGCCGATACTCTTCCTACTCCGCTTCCTGCTTCCGCACCGCTCCAACCTGTGCTTAAACCAAATAATGTCGATTTCCTCTTCGATCTCGAGAAGGGCGCCGGTGTCGCCGTCGCGCCTCCGCCGTCTCAGATTCCGCCTGCGGCTGTCAAATTTCATGATCCGGTGCCGGAGCCCGTCGCTCCGCCGCCGGAGTACCAGTCGCGGCTGAATATGAACCTTGTCGATAGAGTTTCGGCTTCTGATCCGAGCGCGATTCGGCGCCAGCTGCAGCAATTGCAAATTGCGGAGAGCGAGCAATATCGGAGGAAGAGCGAGGATAATTACCCCGCGGGTGATTATTACGTTCAGAAGCTGCCTGAGAAGTTTCCTCCGGCGAATTTGCCCGCCACCGCCCCGGGTTACTGGCCGGAAAAACATGTTTCCGGCGAATCCTATCCGCCGGCTGCCTCCGGTGGAGGAGATGCGCCGGTTTACATGATTTCGGCGCCGGGGACGTACTATCACGCGCCTGTGGTGCGGCCTCAAGCCACCCAGGGGTACTACGCGGTGCAGCGAATGGCTTCAGATGGCTACCGTGAAGCGGCGGTGTACGGCGGCGTGACGCCGCAGCCTAACTTGGCGCCAGGGCAGCCACCGGTTAAGGCTCCCGCGTATACGGAAGGATTCGGTGTGGTGCGGCCAAGTGGGATAGTGGATAATACGGGTGCTCCGTACGCACAGGTAGCGTACGATAGTGCAAGTGGGAGACAAGTTTATTATACTGCACAGGGTGGCGTAGTGCACGCTCCTCCGTACCAAGGCGTTTTTCCACCGGTCACTTCTGAGATGAGACAAACTGCGGTGACGTTGGGTCAAGATGTTAAAGTGATGAACAAAGTTACTCAAGGTTCTCTCTGA 1473 0.5567 MTTIVSLPRSCLSQHKTSHNGSLTRIALSQRILKKKKKKKIKMENYSYQSYPESGDSSPRSREIDFDNPPAPWDEQQQQNYKVKFMCSYAGKIHPRSHDNQLSYVGGETKILAVDRSIKFSVLLAKLSALCELPPQESNGSSLTFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFLFVADTLPTPLPASAPLQPVLKPNNVDFLFDLEKGAGVAVAPPPSQIPPAAVKFHDPVPEPVAPPPEYQSRLNMNLVDRVSASDPSAIRRQLQQLQIAESEQYRRKSEDNYPAGDYYVQKLPEKFPPANLPATAPGYWPEKHVSGESYPPAASGGGDAPVYMISAPGTYYHAPVVRPQATQGYYAVQRMASDGYREAAVYGGVTPQPNLAPGQPPVKAPAYTEGFGVVRPSGIVDNTGAPYAQVAYDSASGRQVYYTAQGGVVHAPPYQGVFPPVTSEMRQTAVTLGQDVKVMNKVTQGSL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2064 490 Gene3D - 103 193 - -
Pvu6g2064 490 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 43 484 - -
Pvu6g2064 490 SUPERFAMILY CAD & PB1 domains 98 195 - -
Pvu6g2064 490 SMART PB1_new 97 193 IPR000270 GO:0005515
Pvu6g2064 490 MobiDBLite consensus disorder prediction 44 73 - -
Pvu6g2064 490 Pfam PB1 domain 98 192 IPR000270 GO:0005515
Pvu6g2064 490 CDD PB1_UP2 86 191 - -
Pvu6g2064 490 PANTHER OS05G0427100 PROTEIN-RELATED 43 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2064 Pvu-Chr6 30414649 30417455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2064 81 191 MAP Kinase Kinase Kinase AT5G57610 45.946 2.49e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2064 - - pvu:PHAVU_006G199200g 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2064 6 30414649 30417455 Pvu6g2064 6 30414649 30417455 ECH
Pvu2g2221 2 37828191 37830150 Pvu6g2064 6 30414649 30417455 PCT