Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2042 ATGACGGGTTTTGGTGCTGAAAGTGACATCTATTGCTTGCAAACCATCAAGAACATGGACCCGTCTAATAATATCTTATCTAGCTGGGATTTCCAGACCAACACTGAGGATGTCATATGTACATTCAGCGGTGTTAAATGCATCAGCAATCATGTGGAAGATAGAGTAATCGGTCTCTGGCTATCTAACATGGGGCTGAAGGGTCAGTTTCCTAGTTGCATTGAAGATTTCACATGGTTGCAGACTCTGAACCTCTCAAACAACGAGCTTTCTGGATATATCCCAAACGATATATCATCTAAGCTGTCATATCTGGAGACACTTGATCTCTCAAATAATTATTTCTCTGGTGAAATTCCAAAGTGTATTGCCAATTTGTCAGGCTTAATTACCCTTCTACTTGATGGCAACCAGTTAACGGGCCAAATCCCACAAGATCTTGGGTTGCTTCCCTGGCTGAGAGATTTTAGTGTTGCTAACAATTTCTTGGAAGGGTCAGTGCCTGTTTTTGGGAGCAATCTTAATGTGAGTTTGAGCTATGTCAATAATAGTGGACTCTGTGGGGGAACACTAGGAAGATGTGACGAGAGCTTGTTTGGAAGATCGTTTTGGTATAGTTTTATTATTGGTTTTGTTTCCTCAGCTACTTCTGTTCTAGTATCTTGCATGTACTATTATGCACCTTGGACAGAATTCAAAAAGAGGAGGAGTAACGCTATTCATCCCCTAATCAAGAAGCAGAACACTGAACAAGAAGCTGAATTGCTACCACTGGCCTTTCAAGAGCAACGAAGCAAAGAGCTATCAATATTGTTGGAGAGATTGATTACTAGAATGAGCTTCAAGGAATTATGCAAGGCAACTGATTACTTTTGCACAGATAACGTGTTGGGGATAGGAACGACAGGGATTATGTACAAGGCAAAGGTATCAAATAACTGTTTTCTGGCAGTTAAAAGACTATATGATGCTGATAAGTACAAGTGGGAATTTTTACTTGAAATAATCATCCCGGGAAGACACAGGCACAGAAACATAGTTCCACTGCATGGATTCTGCATAGAGAAAGAGGAAAGGGTTTTGGTGTATAAGTACATTTCTAATGGAAGACTCAGTGATTGGTTACAATCTGAAGAGGAACATCATCCAATAAAATTAGAATGGCCTGAGAGGATTCACATTGCACTTGGGCTCGCAAGAGGTTTATCTTGGCTCCATAAAAGGTGCAAGATAGTGCACCTCAATTTAGATTCGGATTGTGTCTTGCTGGACGAGAGTTTTGAGCCAAAAATTTCCAATTTTGGCAAGGCAAAATTCCTACACCAGAGTGTTGAAGATCATGTGAGGATGAAAATGTTTCTGGTTGATGGAGTTGGAGTGAAGGGTTATGCTGAGAGGGATGTCTATGATTTTGGAATAATCCTTTTTGAACTTATAACGGGGAAAAGACTAGGCCAATCGGTTGATTCTTCGGACAGTATTAGTGGGCATTTGATGAAGTATATCAGCAAGAACTTGTTCACTGATCCTGCTGACTTTTATGACGCCATTGACGATGGTATCATTGGGAAGGGTTTTGATGATAAAATCGTACGTCTTCTTGAAGTTGCATGTGACTGTGTTAAGACATCTTTAAATCAAAGGCAAAAGATGGTTGATGTGCATCAAACTATAAGAGGTATGTGGGAGGGCTACAAACCCTGCTTTGATTCTGAAAGTCTGAAACAGTCTATGGATTGTGCTGACCATATAACGTGTATCAGCGAAATTGAATGTATCGAATAG 1785 0.4022 MTGFGAESDIYCLQTIKNMDPSNNILSSWDFQTNTEDVICTFSGVKCISNHVEDRVIGLWLSNMGLKGQFPSCIEDFTWLQTLNLSNNELSGYIPNDISSKLSYLETLDLSNNYFSGEIPKCIANLSGLITLLLDGNQLTGQIPQDLGLLPWLRDFSVANNFLEGSVPVFGSNLNVSLSYVNNSGLCGGTLGRCDESLFGRSFWYSFIIGFVSSATSVLVSCMYYYAPWTEFKKRRSNAIHPLIKKQNTEQEAELLPLAFQEQRSKELSILLERLITRMSFKELCKATDYFCTDNVLGIGTTGIMYKAKVSNNCFLAVKRLYDADKYKWEFLLEIIIPGRHRHRNIVPLHGFCIEKEERVLVYKYISNGRLSDWLQSEEEHHPIKLEWPERIHIALGLARGLSWLHKRCKIVHLNLDSDCVLLDESFEPKISNFGKAKFLHQSVEDHVRMKMFLVDGVGVKGYAERDVYDFGIILFELITGKRLGQSVDSSDSISGHLMKYISKNLFTDPADFYDAIDDGIIGKGFDDKIVRLLEVACDCVKTSLNQRQKMVDVHQTIRGMWEGYKPCFDSESLKQSMDCADHITCISEIECIE* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2042 594 ProSiteProfiles Protein kinase domain profile. 291 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2042 594 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 5 562 - -
Pvu6g2042 594 Pfam Leucine rich repeat N-terminal domain 7 47 IPR013210 -
Pvu6g2042 594 PANTHER RECEPTOR-LIKE PROTEIN 55 5 562 - -
Pvu6g2042 594 Pfam Protein kinase domain 294 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2042 594 Gene3D Phosphorylase Kinase; domain 1 253 365 - -
Pvu6g2042 594 SUPERFAMILY L domain-like 33 199 - -
Pvu6g2042 594 Pfam Leucine rich repeat 80 139 IPR001611 GO:0005515
Pvu6g2042 594 Gene3D Transferase(Phosphotransferase) domain 1 366 576 - -
Pvu6g2042 594 Gene3D Ribonuclease Inhibitor 11 194 IPR032675 -
Pvu6g2042 594 SUPERFAMILY Protein kinase-like (PK-like) 268 563 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2042 Pvu-Chr6 30263331 30265870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2042 7 563 Receptor kinase-like Gene Family AT3G28450 34.429 8.19e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pvu6g2042 Pkinase 5.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2042 - - gmx:106795644 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2241 2 38052348 38056537 Pvu6g2042 6 30263331 30265870 PCT