Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2036 ATGGCTTCCCGCACCGAGAACAGGCCTCCTCGCAGCCTCTCCAATAAAAAAGGAGGCGCCGAAGAAGCATTTTCCGACAAGCGTCGGAGGACTGGAACGGAGAGAACGGAGCGACAGGGCGGCCGAGGTAGGGCTCCCTTGGGTGCTCTAAAGGCCGATGCTAACGAAGTTGCCATCGTCGAGGGTTCTGAGTGTAGCGTTGTTGAGTTCACCAAAGAGAAAGTGGAAGCGTTGCTGAATGAGAAAACGAATACGAAGGAGAATCGCTATGATAATAAGAGAAAGACGGAACAGATGGGGGATCTCATTAAACGGCTTAAACTCTGCGTTCGATGGTGTATGAAAGTCGAAGAAGGCCATGTCCAAGAGAAAGAGAAGCTTCAGACTGACCTGGAATCTGCTGAGAAGAAACTCCTTGATACTGAGAACAAGATGGAAATTAAGATTGCAGAGTTGGATGAGACTATATCTAATTTGAAGGCAATAATTTCCTCTTTAGAAGAGAGAATTGTAAGGGAAGAGTCAGATAAAATGGAAGCTATTGCATCTTATAAAAAAGAACAGGAAGCCAGAAGTGCAGCAGAGCAGATGCAAGCTTCTGTTTCAACTGAGCTTGAGAAAGTTCGGGAAGAGAAATCAGCTGCTGAGAGGAAGGTCATTTCAAATGAGGACTTGTTAAAACGAGCACAAGAATATAATATGAGTCTGCAACAGTTCAATACTCGTCTTCAGTCAGATGTTGAAACAAGTAATGAGGCAATTAAACGAGTGGAGATGGAGAAAGCAACCATTGTTGAGACCCTTAGCAATGTGAGGGGCCACAATAAGGCATTGCAGGATCAGTTGGCATCCTTCAGAGTTTCACTGGACGAGGTTACAAAGCAGAAAGAAATGTTAGTAAATGAACTGAAATGCGTGCGGGAAGAATTGAAACAAACTAGGGATGACCGAGATCGTCTGCAGTTACAAGTCCAAACTTTGGCTGCAAAAGTAGAGAAATACGGAGAATCTACAGCGAAATCGTGTGCGCAATTGGATACCTTGACCATTAAAACAAATGCTCTTGAGGAGACATGCTCTTCTCAAAGGGACCAAATATATATGCTGCAACAGCAGTTGATTGCTGAGAAGGAGAAGTTAAAGATGGCTGATTTATCTGCTTCAGAAACAAGAACAGTTTTTGAAGATCAGAGAAGAATTGTTGGTGAACTCCAGGAGCGACTGGCAGAGAAAGAATTCCAAGTAATTGAAGGGGAGAAGTTAAGGAAAAAATTGCACAATACTATCCTGGAGCTAAAAGGAAATATACGCGTCTTCTGTCGTGTCCGACCTTTGCTACCGGATGATGGTCCTGGAACAGACATGGTTCTTTCTTATCCCATGTCAACGGAAGCTCTTGGTCGGGGCATTGAATTGGTACAGAGCGGACAAAAGTACCCTTTCACATTTGACAAGGTATTTAATCACGAGGCTTCTCAGCAAGATGTTTTTGTTGAGATATCACAACTCGTCCAAAGTGCGCTTGATGGTTACAAGGTCTGTATCTTTGCTTATGGTCAGACAGGATCCGGCAAAACCTATACGATGATGGGTAGGCCAGATGCCCCCGATCTAAAGGGTTTGATTCCTCGTTCTCTAGAGCAAATATTTCAGATTAGTCAGTCCCTGAGGGATCAGGGGTGGAATTACAAAATGCAGGTTTCAGTATTGGAAATATATAACGAAACTATCAGGGATTTGTTATCATCAAATCGGTCAAGTGGTTTTGACTCAACCCGAACTGAAAATGGTGTTTCTGTTTCTGGAAAACAGCCATATACTATTAAACACGATGTCAATGGAAACACACATGTTTCAGACCTCACTATAGTCGATGTTTGTAGTGCAAATGAGATTTCATCACTTTTGCAACAAGCAGCTCAAAGCAGGTCTGTAGGAAGAACACACATGAATGAACAGTCGTCACGAAGTCACTTTGTCTTCACTTTGCGTATATGTGGGTTTAATGAGAACACTGAACAACAAGTACAAGGCGTGTTAAATCTCATTGATCTGGCTGGAAGCGAAAGATTGTCAAGGAGTGGAGCAACCGGGGACCGGTTAAAAGAAACCCAGGCTATAAATAAAAGTCTCTCCTCATTGAGCGATGTCATCTTTGCTTTGGCAAAGAAAGAGGAACATGTGCCCTTCAGGAATTCAAAATTGACATACCTTCTCCAGCCTTGTCTTGGGGGAGATTCTAAAACTTTAATGTTTGTGAATATTTCACCCGATCCATCTTCAACCGGAGAGTCACTTTGCTCCCTCCGATTTGCCGCCAGAGTCAATGCCTGCGAGATTGGTATTCCAAGGCGTCAGACTTCTGCCAGGCCCTTGGATTCTCGTTTGAGCAGCTGCTAA 2400 0.4363 MASRTENRPPRSLSNKKGGAEEAFSDKRRRTGTERTERQGGRGRAPLGALKADANEVAIVEGSECSVVEFTKEKVEALLNEKTNTKENRYDNKRKTEQMGDLIKRLKLCVRWCMKVEEGHVQEKEKLQTDLESAEKKLLDTENKMEIKIAELDETISNLKAIISSLEERIVREESDKMEAIASYKKEQEARSAAEQMQASVSTELEKVREEKSAAERKVISNEDLLKRAQEYNMSLQQFNTRLQSDVETSNEAIKRVEMEKATIVETLSNVRGHNKALQDQLASFRVSLDEVTKQKEMLVNELKCVREELKQTRDDRDRLQLQVQTLAAKVEKYGESTAKSCAQLDTLTIKTNALEETCSSQRDQIYMLQQQLIAEKEKLKMADLSASETRTVFEDQRRIVGELQERLAEKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGPGTDMVLSYPMSTEALGRGIELVQSGQKYPFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQISQSLRDQGWNYKMQVSVLEIYNETIRDLLSSNRSSGFDSTRTENGVSVSGKQPYTIKHDVNGNTHVSDLTIVDVCSANEISSLLQQAAQSRSVGRTHMNEQSSRSHFVFTLRICGFNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNACEIGIPRRQTSARPLDSRLSSC* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2036 799 Coils Coil 275 330 - -
Pvu6g2036 799 Coils Coil 198 260 - -
Pvu6g2036 799 Gene3D Kinesin motor domain 377 780 IPR036961 -
Pvu6g2036 799 Coils Coil 117 176 - -
Pvu6g2036 799 MobiDBLite consensus disorder prediction 20 41 - -
Pvu6g2036 799 PANTHER KINESIN-LIKE PROTEIN 35 797 - -
Pvu6g2036 799 Pfam Kinesin motor domain 462 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g2036 799 Coils Coil 68 88 - -
Pvu6g2036 799 CDD KISc_C_terminal 433 780 - -
Pvu6g2036 799 MobiDBLite consensus disorder prediction 1 50 - -
Pvu6g2036 799 SMART kinesin_4 433 786 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g2036 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 776 IPR027417 -
Pvu6g2036 799 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g2036 799 PRINTS Kinesin heavy chain signature 648 665 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g2036 799 PRINTS Kinesin heavy chain signature 679 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g2036 799 PRINTS Kinesin heavy chain signature 728 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu6g2036 799 SUPERFAMILY Tropomyosin 134 382 - -
Pvu6g2036 799 PANTHER KINESIN-LIKE PROTEIN KLP-3 35 797 - -
Pvu6g2036 799 ProSitePatterns Kinesin motor domain signature. 678 689 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu6g2036 799 ProSiteProfiles Kinesin motor domain profile. 435 778 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2036 Pvu-Chr6 30232130 30237464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2036 407 792 Calmodulin-binding Proteins AT5G65930 37.879 3.81e-75 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2036 K10405 - gmx:100818473 1337.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2036 6 30232130 30237464 Pvu6g2036 6 30232130 30237464 ECH
Pvu2g2243 2 38080033 38085890 Pvu6g2036 6 30232130 30237464 PCT