Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2035 ATGGCGCAGAAGCAGAAGCGTCCTTCCCCTCTTGACGAGCCACCAACGGCTTCTTCTTCAGATTCTGAGGAAGAAGAAACGCAGAAACCATCCTCTCTGAGGCACGGAGAGGAAGAGGAAGAAGAAGCTTCGTCTGGAGAAGAGGAAGAAGAATCCTCCGGAGAAGAGGCAGAAGATGATGATCTTCCACCACCTATCACCAAAACCAACCCACCACCCCCTCCCACGAACCCTCACCCACAACCCTCATCCTCTGATTCCGAAACAGCATCCGAATCCGAGACCGAGTCGGAAACTGAATCCACTCCTGCTAAGGCGGTGAAGCCCCTCGCATCCAAGCCCATGGACCAGGCCCCGAAGCTCAAGGCCCTACCTTCTCCGGCGCCACCCAAACCACCGCTGAAACGCGCCGCCGAGAATATCAACTCCAACGTCGCGAAGAAAAAGAAGAAATCCGGCGATTCTTCTTCTTCCGCTGCCGCTTCTGACGAGGAGATGGAAGACGGGAAGAAGTCCGGCGATCAAATGAAGAAGTTTCAGAGGCTGTGGAGCGAGGATGACGAAATCGCCATTCTTAAGGGCTTGGCTGATTTCACCTCAAAAACAGGGCACGACCCTCTAAAGTTTGAGGGTGGCAATGCTTTCCATGCTTTCTTGAAGAAGTCGCTCCATGTGGAAGTTACCAGCAACCAGCTGAAGGAGAAGGCGCGGAGACTGAAGAAGAAGTATGAGACCGCTGCAGTTAGAGGGAATGGCGCTGATGGCCTTACATTTTCAAAGCCGCACGATCAGAGAACGTTTGAGTTGTCGAAAAAGGTTTGGGGAAGTGAGATAGATGGTGCAGTGGCCAATGGTGCAGTGGAAAAGCCCAAGGCTAACGGGAATGCTGCTAAGAGTCCGAAGAAGAAGGAAACCGGTAGCAGGAATGTTTCTTCTGCGAAGAAAACTAAACCTGAACCGAAACCGGAGGTGGTGCCAGGGCCGCGCTTTGACTTGAATGAATCTGAAAAGACGCAGAGTAATCAAAAGCCAGTAAGTTGTGAAGTGAGTATGTTTTTGCATGCAGTGTCCCGTTTTAAAGAGGGTCTGGGTGTTTTTGGGCTGGATGAGGGTGATGTGACGAGGGGGTTGGAATTGATTGGTGAATCGAAGAGGGCAGAGTTGAGGGCAAAGTGGAAGAAGTTACAACGTACTGAGTTGGAACTGTTTGCTAATCGCTCAGAGCTGATTGGGGAGCAGACTAAGTTGATAGTTGAGGCACTTCGGTCCTCCAACCATTAG 1281 0.5137 MAQKQKRPSPLDEPPTASSSDSEEEETQKPSSLRHGEEEEEEASSGEEEEESSGEEAEDDDLPPPITKTNPPPPPTNPHPQPSSSDSETASESETESETESTPAKAVKPLASKPMDQAPKLKALPSPAPPKPPLKRAAENINSNVAKKKKKSGDSSSSAAASDEEMEDGKKSGDQMKKFQRLWSEDDEIAILKGLADFTSKTGHDPLKFEGGNAFHAFLKKSLHVEVTSNQLKEKARRLKKKYETAAVRGNGADGLTFSKPHDQRTFELSKKVWGSEIDGAVANGAVEKPKANGNAAKSPKKKETGSRNVSSAKKTKPEPKPEVVPGPRFDLNESEKTQSNQKPVSCEVSMFLHAVSRFKEGLGVFGLDEGDVTRGLELIGESKRAELRAKWKKLQRTELELFANRSELIGEQTKLIVEALRSSNH* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2035 426 PANTHER BNAANNG10740D PROTEIN-RELATED 10 425 IPR007592 GO:0006355
Pvu6g2035 426 MobiDBLite consensus disorder prediction 41 60 - -
Pvu6g2035 426 MobiDBLite consensus disorder prediction 284 343 - -
Pvu6g2035 426 MobiDBLite consensus disorder prediction 22 40 - -
Pvu6g2035 426 PANTHER STOREKEEPER PROTEIN-LIKE 10 425 - -
Pvu6g2035 426 MobiDBLite consensus disorder prediction 65 81 - -
Pvu6g2035 426 Coils Coil 229 249 - -
Pvu6g2035 426 MobiDBLite consensus disorder prediction 82 102 - -
Pvu6g2035 426 MobiDBLite consensus disorder prediction 1 178 - -
Pvu6g2035 426 MobiDBLite consensus disorder prediction 295 324 - -
Pvu6g2035 426 MobiDBLite consensus disorder prediction 163 178 - -
Pvu6g2035 426 Pfam Protein of unknown function, DUF573 179 275 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2035 Pvu-Chr6 30225554 30227459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2035 107 423 GeBP Transcription Factor Family AT4G25210 32.716 3.63e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pvu6g2035 DUF573 5.7e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2035 - - gmx:100791520 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2035 6 30225554 30227459 Pvu6g2035 6 30225554 30227459 ECH