Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2018 ATGAAATTACTCATGGAGAAAACCAAGTTCACCCTTTTATTTCTTGTTACTTGTTGCTATTTCATATCCTTGTTTCCTTCATCTTTGGAAGCAGAGGATGAAATAACTCCTCCACAAACCATCAGTGGCAACCAGACACTAGTCTCACCTTCTCAAAATTTTGAACTGGGTTTCTTCAGTCCTGGCAATTCAACTCACATTTATCTTGGAATATGGTACAAGCGTATCCCAGACCAGACAGTTATTTGGATTGCAAATAGAGACAATCCACTAGTTAACTCTGGTGGCTCCTTGACATTCAGTGGTGATGGCAAGCTCATTCTTCTAAGCCACACGGGAAGTGTTGCATGGTCCTCAAACTCATCTGGACCTGCAAAAAATCCAGTGGCACAGCTTCTAGATTCCGGAAACTTTGTGTTGAAAGACTATGGAAATGAGAGATTTTTGTGGGAGAGTTTTGATTACCCATCTGACACATTGATACCAGGAATGAAACTAGGTTGGAACTTCAAAACTGGCTTGAATCGACTCTTGACTTCATGGAAAACCACTTCTGATCCTTCTCCAGGAGAATACACCTACAGTGTGGATCCACGTGGCCTTCCTCAGCTTTTCCTTCACAAGAGAAACAAGCAGGTCTTCAGAAGTGGACCATGGTATGGACAACAATTCAAAGGTGACCCGGTTCTCAGTGCAAATCCAGTTTTCAAACCCATATTTGTGTTTGATTCTGATGAAGTGTCTTACTCCTATGAGACCAAAGACACCATCATTTCAAGATTTGTGCTCAGTCAGTCTGGTTTGATTCAGCATTTTTCATGGAATGATCAACATTCAAGTTGGTTTTCTGAATTTTCAATTCAAGGGGACCGTTGTGATGATTATGGCCTTTGTGGTGCTTACGGTTCTTGTTACATCAATACCTCCCCTGTTTGCAAGTGTTTGAAGGGTTTTGAGCCTAAGCTTCCGCAGGAATGGGAAAGGTCTGAGTGGTCAGATGGATGTGTTAGAAAAAACACAGAGGTTTGCAGCAATGGAGATGCATTTCAGCAGTTTACAGGAATGAAGCTTCCAGATGCCGCTGAGTTTCGTACAAACTACAGCATCAGCATTGATCACTGTGAGAAAGAATGCTCTAAGAACTGCTCCTGTGTTGCTTATGCAAACCTGGATATAAATGCAAGCGGAAAAGGTTGTATTGCATGGTTTGGGAATTTATTTGATATAAGAGAGGTTTCTGTGAATGGACAAGATTTCTACCTGAGGGTTGCAGCTTCAGAAATAGGTAAGAACATTGAAGGTTCAAATGCTGATGGAAGTAAAAGGAAGAAACTCATACTGTTTCCTGTGGCTGCATCTGTAACTTCAACAATTATTGTATCAACATTGTGGTTGATAATTAAGAAATGCAGAAGAAATGGAGCCAAACAGACCGGTAGTCAGTTTAGTGTTGGCAGAGTCAGGAGTGAAAGGAATGAATTTGAACTTCCAATGTTTAAGATTGCCATGATTGAAGCCGCCACTGGGAATTTCTCTAGTTACAACAAGATTGGAGAAGGAGGATTTGGTCCTGTATACAAAGGTCAACTTCCATCAGGACAGGAAGTAGCTGCGAAAAGGCTATCAGAGAGTTCTGGACAAGGCCTGCAGGAGTTCAAGAATGAGGTCATTTTGATCTCCCAACTTCAGCATCGAAATCTTGTCAAGCTTCTGGGTTGTTGCATTGACGGTGAAGATAAAATATTGATCTATGAATACATGCCAAACGGAAGCTTGGACTCCTTATTATTCGATGAAACCAAGCGTTCTGTGCTCAGTTGGGAGAAGAGGCTAGACATAATTATTGGCATTGCTCGTGGAGTTCTCTACCTTCACAGAGATTCAAGACTGAGAATCATCCATAGAGACCTGAAAGCAAGCAATGTTCTTTTAGACAGTGAAATGAATCCAAAAATTTCTGACTTCGGAATGGCAAGAATGTTTGGTGGAGATCAAACGGAAGCAAAGACCAAGAGGGTAGTGGGAACCTATGGATATATGGCCCCAGAGTACGCAATAGATGGACACTTCTCTTTTAAATCGGATGTTTATAGCTTTGGGGTTTTACTCTTGGAGCTGTTGAGCGGGAAGAAAAACAAAGGGTTTGTTCACCCAGATCACAAACTGAATCTCCTAGGCCATGCATGGAAGGTATGGAATGAAGAAAGGGCGTTGGAGGTGATGGATCCATTTGTTGGGAAAAAGTTTCCGACATGTGAAGCTCTAAGGTGTATAAAAGTGGGTCTGTCATGTGTTCAAGAGTTCCCAGAAGATAGGCCAACAATGTCATCAGTTGTTTTGATGTTGGAGAGTGAGAGTGTGTTGATCCCTCAACCCGGAAGGCCAGGATTATATTCGGAGAGATTTTTCTCTCAGACGAATTCATCATCAAACGCTCCACTCAACTCTGCTTCCAATCACACAACTGCTACTTCGCTAGAGGGTCGTTGA 2490 0.4205 MKLLMEKTKFTLLFLVTCCYFISLFPSSLEAEDEITPPQTISGNQTLVSPSQNFELGFFSPGNSTHIYLGIWYKRIPDQTVIWIANRDNPLVNSGGSLTFSGDGKLILLSHTGSVAWSSNSSGPAKNPVAQLLDSGNFVLKDYGNERFLWESFDYPSDTLIPGMKLGWNFKTGLNRLLTSWKTTSDPSPGEYTYSVDPRGLPQLFLHKRNKQVFRSGPWYGQQFKGDPVLSANPVFKPIFVFDSDEVSYSYETKDTIISRFVLSQSGLIQHFSWNDQHSSWFSEFSIQGDRCDDYGLCGAYGSCYINTSPVCKCLKGFEPKLPQEWERSEWSDGCVRKNTEVCSNGDAFQQFTGMKLPDAAEFRTNYSISIDHCEKECSKNCSCVAYANLDINASGKGCIAWFGNLFDIREVSVNGQDFYLRVAASEIGKNIEGSNADGSKRKKLILFPVAASVTSTIIVSTLWLIIKKCRRNGAKQTGSQFSVGRVRSERNEFELPMFKIAMIEAATGNFSSYNKIGEGGFGPVYKGQLPSGQEVAAKRLSESSGQGLQEFKNEVILISQLQHRNLVKLLGCCIDGEDKILIYEYMPNGSLDSLLFDETKRSVLSWEKRLDIIIGIARGVLYLHRDSRLRIIHRDLKASNVLLDSEMNPKISDFGMARMFGGDQTEAKTKRVVGTYGYMAPEYAIDGHFSFKSDVYSFGVLLLELLSGKKNKGFVHPDHKLNLLGHAWKVWNEERALEVMDPFVGKKFPTCEALRCIKVGLSCVQEFPEDRPTMSSVVLMLESESVLIPQPGRPGLYSERFFSQTNSSSNAPLNSASNHTTATSLEGR* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2018 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Pvu6g2018 829 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Pvu6g2018 829 Pfam PAN-like domain 343 409 IPR003609 -
Pvu6g2018 829 Gene3D Transferase(Phosphotransferase) domain 1 587 788 - -
Pvu6g2018 829 SUPERFAMILY Protein kinase-like (PK-like) 492 783 IPR011009 -
Pvu6g2018 829 Gene3D Phosphorylase Kinase; domain 1 474 586 - -
Pvu6g2018 829 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 824 - -
Pvu6g2018 829 PIRSF SRK 5 829 IPR024171 GO:0004674
Pvu6g2018 829 MobiDBLite consensus disorder prediction 807 829 - -
Pvu6g2018 829 Pfam Protein tyrosine and serine/threonine kinase 514 780 IPR001245 GO:0004672|GO:0006468
Pvu6g2018 829 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 23 824 - -
Pvu6g2018 829 CDD PAN_AP_plant 343 424 - -
Pvu6g2018 829 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Pvu6g2018 829 Gene3D Hepatocyte Growth Factor 340 422 - -
Pvu6g2018 829 SMART blect_4 38 156 IPR001480 -
Pvu6g2018 829 Pfam S-locus glycoprotein domain 214 321 IPR000858 GO:0048544
Pvu6g2018 829 ProSiteProfiles Protein kinase domain profile. 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2018 829 Gene3D - 28 153 IPR036426 -
Pvu6g2018 829 Pfam D-mannose binding lectin 80 182 IPR001480 -
Pvu6g2018 829 SMART ntp_6 344 423 IPR003609 -
Pvu6g2018 829 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Pvu6g2018 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 187 IPR036426 -
Pvu6g2018 829 CDD STKc_IRAK 517 783 - -
Pvu6g2018 829 CDD B_lectin 39 156 IPR001480 -
Pvu6g2018 829 SMART serkin_6 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2018 Pvu-Chr6 30144775 30148572 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2018 437 824 Receptor kinase-like Gene Family AT4G05200 51.015 3.54e-126 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu6g2018 PK_Tyr_Ser-Thr 5.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2018 - - gmx:100804024 1474.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2265 2 38368702 38370261 Pvu6g2018 6 30144775 30148572 PCT