Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2014 ATGAATTCCACTGCTCAAATTTCCCATTATGGGAATCTAGTGCTGAAAGATGACTCCACGGGACAGACCATATGGGAGAGTTTCGAGCATCCTTGTGATGCAGCAGTGCCAACCATGAAGATCAGTGCTAACAAAATCACAGGTCAGAAAATACAGTTTGTGTCAAGGAAAAGTGCTTCCGATCCTTCTACTGGCTATTTCTCTGCTTCTCTTGAACGTTTGCATGCTCCAGAGGTGTTTATATGGATTAATGGAACTCGACCTTATTGGAGGACTGGTCCATGGAATGGTAGAATCTTCATTGGGACACCATTGATGTCAACTGGGTATCTTTATGGATGGAGTGTAGGATATGAAGGAAATGATATTGTTTATCTAACTTACAGTTTTGCTGACCCATCTTCATTTGGAATCCTTACCCTGTCTCCAGAAGGAAAGCTTAAATTGGTAAGGTATTATAACAAAAAGCAAGGGTTGACTTTGGATCTAGGACTTTCTGATTGCGATGTTTATGGCACATGTGGGGCATTTGGAAGCTGTAACGGGCAGAGTTCACCAATATGTAGCTGTTTGAGTGGATATCAGCCCAGGAATCAAGAGGAGTGGAGAATGAAAAATTGGACTAGTGGGTGTGTGAGAAAGGTGCCACTAAATTGTGAGAGGTTAGACAATGGGAGTGAAGCTGTGCAAGAAGATAGATTTTTGAAACTTGAAACAATGAAAGTACCAGATTTTGCGGAGAGATTAGATGTTGAGGAAGGCCAGTGTGGAACACAGTGCTTGAAGAATTGCTCTTGTTTGGCGTATGCATATGATGCTGGCATTGGGTGCTTGTATTGGACCAGAGACTTAATTGACTTGCAAAAATTCCAAACTGCAGGCATTGATCTCTACATCCGTCTCGCCCATTCAGAATTTCAATCGAGTAATGCACAAGAGCATACTAACAAAAGAAGAGGCAAGGGATTAATCATCGAAATTACATTGGCAACTGCTGCAGCAATAATCATCTTGGCCATCTGTGCTTTTCTAGCCATTCGTAGATTTCACTCGAGTAAGAGAACTGCTAAAAATTCGGGAAGTCAGAATCAAAGAGTGACTGCGGTCCAGAAATCAGCTAAACTGGATGAGCTACCGTTATTTGATTTTGAAGTCGTCGCAAATGCTACAAACAGTTTTCACTTAGCTAATACGCTTGGAAAGGGTGGTTTTGGTCCAGTTTACAAGGGACTATTGTCAGATGGTCAGGAAATTGCAGTGAAAAGACTCTCCAGAGCATCTGGACAAGGTGTGGAAGAATTTATGAATGAAGTGGTGGTGATTTCTAAACTTCAACATCGCAATCTTGTAAAACTTCTTGGCTGCTGCATTGAAGGAGACGAGAAAATGCTCATCTATGAATTCATGCCAAATAAAAGTTTGGATGCATTCATCTTTGATCCACTCCGGCGGAAAGTTCTAGACTGGACAAAACGTTTTACTGTAGTTGAAGGAGTTGCTCGCGGCTTAATCTATCTCCACAGAGATTCTAGATTAAAAATTATACATAGAGATTTGAAGGCAAGTAATATCTTACTAGATGCAGATATGAATCCAAAGATATCAGACTTTGGTTTGGCTAGAATACATAAAGGGGAGGATGAAGTTAACACTAAGAGGGTTGTTGGCACATATGGCTACATGTCCCCTGAATATGCAATGGAAGGATTATTTTCTGAGAAATCAGATGTATATAGCTTTGGAGTTTTGTTACTGGAGATTATTAGTGGAAAAAGAAACACTAGTTTTCGTAATGATGATCAGTCTCTCAGCCTCATAGGATATGCGTGGAATCTATGGAACGAAGACAATATTAGCTTTTTGGTTGATCCAGAGATATCAGCTTCAGGATCTGAGAATCATATTTTGAGGTGCATCCATATAGCATTTCTTTGTGTGCAAGAAGTTGCAAAAACTAGACCAACTATGACTACTGTGCTCTCGATGCTTAACAGTGAGATATCCCATCTACCTCCTCCTAGGCAAGTTGCATTTGTTCAGAAGCAAAGTTCATCAAGTTTAGAGTCTTCTTCTCGAGAAAATCATTGTAACTCCAACAACCATGTAACTCTTACTGATATCCAGGGAAGATAA 2133 0.4037 MNSTAQISHYGNLVLKDDSTGQTIWESFEHPCDAAVPTMKISANKITGQKIQFVSRKSASDPSTGYFSASLERLHAPEVFIWINGTRPYWRTGPWNGRIFIGTPLMSTGYLYGWSVGYEGNDIVYLTYSFADPSSFGILTLSPEGKLKLVRYYNKKQGLTLDLGLSDCDVYGTCGAFGSCNGQSSPICSCLSGYQPRNQEEWRMKNWTSGCVRKVPLNCERLDNGSEAVQEDRFLKLETMKVPDFAERLDVEEGQCGTQCLKNCSCLAYAYDAGIGCLYWTRDLIDLQKFQTAGIDLYIRLAHSEFQSSNAQEHTNKRRGKGLIIEITLATAAAIIILAICAFLAIRRFHSSKRTAKNSGSQNQRVTAVQKSAKLDELPLFDFEVVANATNSFHLANTLGKGGFGPVYKGLLSDGQEIAVKRLSRASGQGVEEFMNEVVVISKLQHRNLVKLLGCCIEGDEKMLIYEFMPNKSLDAFIFDPLRRKVLDWTKRFTVVEGVARGLIYLHRDSRLKIIHRDLKASNILLDADMNPKISDFGLARIHKGEDEVNTKRVVGTYGYMSPEYAMEGLFSEKSDVYSFGVLLLEIISGKRNTSFRNDDQSLSLIGYAWNLWNEDNISFLVDPEISASGSENHILRCIHIAFLCVQEVAKTRPTMTTVLSMLNSEISHLPPPRQVAFVQKQSSSSLESSSRENHCNSNNHVTLTDIQGR* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2014 710 ProSiteProfiles Protein kinase domain profile. 393 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2014 710 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 97 IPR036426 -
Pvu6g2014 710 CDD STKc_IRAK 399 664 - -
Pvu6g2014 710 Pfam Protein tyrosine and serine/threonine kinase 394 662 IPR001245 GO:0004672|GO:0006468
Pvu6g2014 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Pvu6g2014 710 Gene3D Phosphorylase Kinase; domain 1 366 468 - -
Pvu6g2014 710 MobiDBLite consensus disorder prediction 688 710 - -
Pvu6g2014 710 SMART ntp_6 229 301 IPR003609 -
Pvu6g2014 710 PIRSF SRK 1 710 IPR024171 GO:0004674
Pvu6g2014 710 Gene3D Transferase(Phosphotransferase) domain 1 469 671 - -
Pvu6g2014 710 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 709 - -
Pvu6g2014 710 Pfam PAN-like domain 229 287 IPR003609 -
Pvu6g2014 710 ProSiteProfiles PAN/Apple domain profile. 219 302 IPR003609 -
Pvu6g2014 710 CDD PAN_AP_plant 215 302 - -
Pvu6g2014 710 Pfam S-locus glycoprotein domain 90 197 IPR000858 GO:0048544
Pvu6g2014 710 SUPERFAMILY Protein kinase-like (PK-like) 377 695 IPR011009 -
Pvu6g2014 710 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 7 709 - -
Pvu6g2014 710 Pfam D-mannose binding lectin 2 57 IPR001480 -
Pvu6g2014 710 SMART serkin_6 393 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2014 Pvu-Chr6 30118691 30122328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2014 310 694 Receptor kinase-like Gene Family AT4G23190 50.129 6.59e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu6g2014 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2014 - - pvu:PHAVU_006G194300g 1408.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2014 6 30118691 30122328 Pvu2g2270 2 38407547 38411168 PCT