Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2011 ATGGATTTCTCAACTCTAACACTTGTTGTTATCATAGGTTGCTACTTTTGTCACTGCTTGAGTACTGCCAATGATACCATCACATCTGGCCAATTCTTCAGAGATCCTCAAACTCTCATCTCAGCTAATGGAGTCTTCAAGTTAGGATTCTTCAGCCCTCAAAATTCATCATTTCGCTACCTGGGAATCTGGTATCTCTCTGACTCCAATGTCATATGGGTAGCTAACAGAAACCAGCCACTGACCATCAACTCTTCCGGGCTTGTTCAAATTTCTGTACATGGCAATCTTGTGGTGTTAGATAGCAACAAAAGGGTTGTTTGGTCATCAAATGTGACACACATTGCAACCAATTCAACCGCCAAACTTTTAGAAACAGGAAATCTCGTCCTGCTAAATGGTGTCACGGGACAAAGTATATGGGAGAGTTTCCAACATCCCAGTCACGCTCTCGTGCCAAGCATGAAATTTGGTACTAACAAAAGAACAGGTGAGAAAGTACGAATAACATCGTGGAGAAGTCCTTCTGATCCTTCTGTTGGGTACTATTCGACTACTCTTGAACACCCCAACACTCCAGAAATGTTTTTCTGGTTGAATGAAACGAAACCATATCATCGTTCTGGTCCATGGAATAATCAGATTTTTATTGGCTCGCCCGAGATGTCACCTGGTTATCTAAATGGATGGAGTATGATGACTGACATAGAAGACGAAACTGTTTATCTTTCTTATAATTTGCCAAATCAATCTTACTTTGGAATCATGACCTTGAATCCACAGGGTCAAATTGTATGCTCATGGTGGAACAACGAAAAGTTAGTTCAGAAGATGGCGATGCAGAGAACTGTCTGCGATCTTTATGGCTATTGTGGGGCATTTGCTACCTGTAATGTTCAGAGTTCACCAATATGCAGCTGTTTGACTGGATATGGGCCCAAAAATGTAGAGGAGTGGAATAGAAAAAATTGGACTAGTGGGTGTGTAAGGAGTGAGCCACTGCATTGTGGGGAACACACTAATGCAAGTGAAGTTAGAAAAGATGTGTTTTTGAAGCTTGAGAATATGAAAGTGCCAGACTTTGTACATAGGTCAGATTCTTTGGAAGATGAATGCAAAGCAGAGTGTTTGGAGAATTGCTCTTGTGTGGCCTTCGCATATGACAGAGGCATTGGATGCATGGTTTGGAGTGGAGACTTGATTGACATACAGAAGTTCTCAAGTGGAGGGGTTGATCTTTACATTCGCGAGCCACCTTCAGAAATCGAAAAACATTCAGATACAAGAAGAAAAAAGAGATTTATTATCCCAGTTGGAGTTGGAGTACCTATAGGAATGCTTATCTTGGCAGGCTGCCTTTATCTCTCATGGAAATGCACTGATAAATCCACAGGAAAAATATATTCCCAAAGGCAAGGAAGGAATCAGAAACAGGTAAAATTGAATGATGAGTTACCCCTTTTCAGTTTTGAAGAACTTGTAAATGCTACACACAATTTTCACTCGTCCAACGAGTTAGGTAAAGGAGGCTTTGGTTCAGTATATAAGGGACAACTGAAAGAAGGAGCCCAAATAGCAGTGAAAAGACTTTCAGAAACTTCTGGACAAGGACTAGAAGAATGCATGAATGAGGTATTAGTGATTTCAAAGCTTCAACATCGCAATCTTGTCAAACTTCTTGGCTGCTGTATTAAACAGGAGGAGAATATGTTGGTATACGAGTACATGCCTAACAAGAGTTTGGATGTAATATTATTTGATCCAGTAAAAAAGAAAGATCTAGATTGGCCAAAACGCTTCAATATAATTGAAGGAATCTCTCGAGGTTTGCTTTATCTCCATAGAGATTCTAGACTAAAAATTGTGCACAGGGATTTGAAAGTTAGTAACATCTTGTTGGATGAAGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATATTTGGAGGCAATGATATGCAGACCAATACTAGAAGGGTTGTTGGAACATTTGGTTATATGTCTCCAGAGTATGTATTCAGAGGGTTGGTTTCTGAGAAATTAGATGTCTTCAGCTTTGGAGTGTTGTTGCTAGAAATCATTAGTGGAAGAAAAATCAGCAGCTATTTTGGTTGTGACCAATCATTGAGTCTCTTGGGATTTGCTTGGAAATTATGGAATGAAAAGGACATCCAATCCCTGATAGATCCAGAAATATGTAATCCAAATAATGTAAATGACATAGTGAGATGCGTGCACATTGGACTTCTTTGTTTGCAAAATCTTGCAAAAGAAAGGCCAAGTATGGCTACTGTAGTTTCAATGCTGAATAGTGAGATTCTTAATCTTCCTTGCCCTTCACATCCTGCATTCGTGGAAAGGCAAATTGCATCGAGTGCAGAGTCATTTCAACAGAACAACACAGCACACTCCATCAACAATGTTACTGTCACAGTCATGATGCAAGGTAGATAG 2460 0.398 MDFSTLTLVVIIGCYFCHCLSTANDTITSGQFFRDPQTLISANGVFKLGFFSPQNSSFRYLGIWYLSDSNVIWVANRNQPLTINSSGLVQISVHGNLVVLDSNKRVVWSSNVTHIATNSTAKLLETGNLVLLNGVTGQSIWESFQHPSHALVPSMKFGTNKRTGEKVRITSWRSPSDPSVGYYSTTLEHPNTPEMFFWLNETKPYHRSGPWNNQIFIGSPEMSPGYLNGWSMMTDIEDETVYLSYNLPNQSYFGIMTLNPQGQIVCSWWNNEKLVQKMAMQRTVCDLYGYCGAFATCNVQSSPICSCLTGYGPKNVEEWNRKNWTSGCVRSEPLHCGEHTNASEVRKDVFLKLENMKVPDFVHRSDSLEDECKAECLENCSCVAFAYDRGIGCMVWSGDLIDIQKFSSGGVDLYIREPPSEIEKHSDTRRKKRFIIPVGVGVPIGMLILAGCLYLSWKCTDKSTGKIYSQRQGRNQKQVKLNDELPLFSFEELVNATHNFHSSNELGKGGFGSVYKGQLKEGAQIAVKRLSETSGQGLEECMNEVLVISKLQHRNLVKLLGCCIKQEENMLVYEYMPNKSLDVILFDPVKKKDLDWPKRFNIIEGISRGLLYLHRDSRLKIVHRDLKVSNILLDEELNPKISDFGMARIFGGNDMQTNTRRVVGTFGYMSPEYVFRGLVSEKLDVFSFGVLLLEIISGRKISSYFGCDQSLSLLGFAWKLWNEKDIQSLIDPEICNPNNVNDIVRCVHIGLLCLQNLAKERPSMATVVSMLNSEILNLPCPSHPAFVERQIASSAESFQQNNTAHSINNVTVTVMMQGR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2011 819 CDD STKc_IRAK 506 772 - -
Pvu6g2011 819 SMART serkin_6 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2011 819 Pfam PAN-like domain 346 403 IPR003609 -
Pvu6g2011 819 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Pvu6g2011 819 SMART blect_4 30 147 IPR001480 -
Pvu6g2011 819 Gene3D - 18 145 IPR036426 -
Pvu6g2011 819 SUPERFAMILY Protein kinase-like (PK-like) 483 794 IPR011009 -
Pvu6g2011 819 ProSiteProfiles Protein kinase domain profile. 500 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2011 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Pvu6g2011 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 178 IPR036426 -
Pvu6g2011 819 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 18 815 - -
Pvu6g2011 819 CDD B_lectin 37 147 IPR001480 -
Pvu6g2011 819 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Pvu6g2011 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Pvu6g2011 819 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Pvu6g2011 819 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Pvu6g2011 819 Gene3D Transferase(Phosphotransferase) domain 1 576 777 - -
Pvu6g2011 819 Pfam Protein tyrosine and serine/threonine kinase 502 771 IPR001245 GO:0004672|GO:0006468
Pvu6g2011 819 Gene3D Phosphorylase Kinase; domain 1 461 575 - -
Pvu6g2011 819 Pfam D-mannose binding lectin 71 173 IPR001480 -
Pvu6g2011 819 CDD PAN_AP_plant 333 418 - -
Pvu6g2011 819 SMART ntp_6 345 417 IPR003609 -
Pvu6g2011 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2011 Pvu-Chr6 30099024 30102747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2011 470 813 Receptor kinase-like Gene Family AT4G11530 50.141 1.28e-115 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu6g2011 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2011 - - gmx:106794168 1387.47