Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2008 ATGAGGAAGTGTGATCTCTGTAACAGTCCTGCAAAGTTGTCTTGTGAATCAGATCAAGCCAGCCTCTGTTGGAAATGCGATGCTAAGGTTCACAGTGCAAACTTCCTCGTCACCAAACATCCCAGGATTCTTCTCTGCCACGTTTGTCAGTCGCTAACGGCATGGCAAGGAACTGGACCCAAGTTTGTACCCACCATCTCAATTTGCAACACTTGTGTTAACAACAACAGTGGGAGCAGCAGCCGTCAGATTCACCATGAAGATGATGATGGTGTGATGGAGGATCATGTAGAAAACGATGAGCGTGGTGTGGAAGAAGATGATGAAGAAAATCAAGTGGTTCCATGGACATCTACACCACCGCCCCCAGCTTCCACTTCTTCAAATAGTGTTGCAACTGCTTCTACCACCTCCTCTAATGCTGAAGAGGGTACCTCGGATTAA 444 0.4707 MRKCDLCNSPAKLSCESDQASLCWKCDAKVHSANFLVTKHPRILLCHVCQSLTAWQGTGPKFVPTISICNTCVNNNSGSSSRQIHHEDDDGVMEDHVENDERGVEEDDEENQVVPWTSTPPPPASTSSNSVATASTTSSNAEEGTSD* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2008 147 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 134 - -
Pvu6g2008 147 MobiDBLite consensus disorder prediction 82 99 - -
Pvu6g2008 147 MobiDBLite consensus disorder prediction 123 147 - -
Pvu6g2008 147 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 134 - -
Pvu6g2008 147 MobiDBLite consensus disorder prediction 76 147 - -
Pvu6g2008 147 CDD Bbox1_BBX-like 3 45 - -
Pvu6g2008 147 SMART bboxneu5 1 45 IPR000315 GO:0008270
Pvu6g2008 147 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2008 Pvu-Chr6 30086587 30087282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2008 2 107 C2C2-CO-like Transcription Factor Family AT4G27310 50.000 3.03e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu6g2008 zf-B_box 2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2008 - - vun:114188834 216.083