Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2005 ATGGACAACACAACCATGACATCATTTAATAGCTCAGATCAATCCATAATTTGCTATACACCAATGAAGACAACAACAAATGGTTTATGGAAAGGCGATAACCCTTTAGATTATTCTCTTCCTCTATTTACCTTGCAATTAACATTAGTGGTATGTGCAACACGATTTTTTGCTTTAATCCTCAAGCCCTTTAACCAACCTCGTGTAATTGCTGAAATCTTGGGTGGATTGCTTTTGGGTCCATCAGTAATGGGTAGAAATGAAAAATTTGCCAATGTGGTGTTCCCTCTTAAAAGTGTAATGGTGGTGGAGACAATGGCAAACATGGGTCTGATATACTTTGTGTTCTTGGTTGGGTTAGAGATGGACATTTCAATCATCAAACGTACTGGAAAGAAGACAATATTGATGGCCCTTGCTGGTATGGTATTGCCCTTTATGATTGCTATTTGTTTATCCTCTTTAATAGCTGACACAAATGAAATAGACCAAACCAATTGTGTCCTCTATCTTGGTATTGTTCTATCTGCCACTGCATTCCCGGTGCTTGCTCGAATGCTTGTTGAGCTCAAACTCATCAACACAGAGTTAGGGAAACTTGCTCTATCAACTTCTCTCATCAATGATGTGTGTGCATGGATGTTGTTGGCTTCTGCTATTGCTTTATCAGATGAAAGAGTTAACATCTGGGCATCTTTGTGGGTTGGAGTATCAAATATTTTTTTTCTTTCTTTCTCCTTTGTTATTGTTAGACCAATAATGTCGTGGTTGATCGAGAAAACCCCAGAGGGAAAAGCCTTTAGTGAGTTTCAATTATGCATTGTTCTTACTGGGGTCATGATCTCAGCCTTCATCACAGATGTCCTTGGAACACATAGTATTTTTGGAGCTTTTGTGTATGGCCTAGTTATTCCAAATGGGCCACTTGGAGCTGCAATAATAGAAAAACTAGAAGACTTTGTTTCAGGACTTTTGCTTCCTCTCTTTTATGCCATTAGTGGGCTTAAGACCAATATCAACTTAATCAGTGGAACTAATACTTGGACTTTTGTGCTCTCGGTGATTCCTCTCTCTTATCTTGGCAAGATTGCTGGGACTCTCCTTGTTTCAAACATGTTCCAAATACCAAACCGTGATGGGGTTGTTCTTGGTTTACTTATGAACTCTAAAGGTCTTATTGAAATTATTGTGCTCAATGTTGGGAGGGAACAAAAGGTCTTAAATGATAAAATATTTTCAGTTATGATCGTTGTAATATTGATAATGACAACAATGATTTCACCAATTGTAACATTAATTTATAAGCCAAGAAGAAGACTTATACCTTATAAAAGGAGGACAATACAAAATTCAAGACTTGAGGGAGAGTTAAGAGTCCTTGTGGGTATTCACACTCCTCGAAATGTTCCCACACTAATTAATCTACTTGAAGCAACTTACCCCAACAAAAGGTCTCCATTGTGTGCTTATGTGCTCCACTTGGTTGAACTCACTGGCAGAGCTTCTGCAATGCTCACTGTCCATGCTAATAGGGAATCAGGAGGTCCAGCTCTCAACAAAACACAAGCACAAACCAACCACATCATCACAGCATTTCAAAACTTTGAGGAACATGACAATTATGCTCAAGTCCAACCTTTAACAACAATTTCCCCTTACTCCACCATGCATGAAGACATATGCAGTTTGGCTGAGGAGAAAAGGGTGTCCATCATCATTATTCCTTTCCATAAGCAACAAACAGTTGATGGAGAAATGGAAGATACAATCCCAGCATTCAGAATGGTGAACCACAATCTATTGCAAAATTCACCCTGTTCAGTTGGTATACTTGTGGATAGAGGCCTTAATGGATCCAACCGCTTGATTGGAAATCTAGCATCTCATCAAGTAGTTGTGCTATATTTTGGAGGACCAGATGACAGAGAGGCCTTAGCTTATGGATGGAGAATGTCAAGACATCCAAGGGTTCGCCTTACTGTCATGCACTTTATTCCAAGCCTATATTCAAATCAAACTTCAAAATCAGATCACTTATGGGCCAAGATTGATCGAAGTTTCACCACTATAAAAAATGGGAATGAGAACAAACTAGATGAGGAGTACATAAGTGAGTTCAAGATGATGGTTGCACATGATGATTCAGTCATTTACATGGACAAGGTTGTGAACAATGGGGAGGAAACTGTTGCAGCAATAAGATCCATAAACAATGTAAACGACTTATTCATAGTTGGGAGAGGACAAGGGACAATGTCACCACTGACAGATGGCCTAACAGATTGGAGTGAGTGTCCTGAATTAGGAGCCATTGGAGATTTACTAGCCTCTTCAGACTTTGAAACAACAGCTTCAGTGTTGGTGTTGCATCAATATGTAGGACAAGGGCCAGATGGAGAGGATAACTTTGTGGTTGAAAGACCATGGGAATCAAGTGAATTGAATCAAAACATAAATCAACAACAGTATATGCAAAGATATGCAACGCCAATGGAAACAAGACACTCTTTTTTTTAA 2517 0.3905 MDNTTMTSFNSSDQSIICYTPMKTTTNGLWKGDNPLDYSLPLFTLQLTLVVCATRFFALILKPFNQPRVIAEILGGLLLGPSVMGRNEKFANVVFPLKSVMVVETMANMGLIYFVFLVGLEMDISIIKRTGKKTILMALAGMVLPFMIAICLSSLIADTNEIDQTNCVLYLGIVLSATAFPVLARMLVELKLINTELGKLALSTSLINDVCAWMLLASAIALSDERVNIWASLWVGVSNIFFLSFSFVIVRPIMSWLIEKTPEGKAFSEFQLCIVLTGVMISAFITDVLGTHSIFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLLPLFYAISGLKTNINLISGTNTWTFVLSVIPLSYLGKIAGTLLVSNMFQIPNRDGVVLGLLMNSKGLIEIIVLNVGREQKVLNDKIFSVMIVVILIMTTMISPIVTLIYKPRRRLIPYKRRTIQNSRLEGELRVLVGIHTPRNVPTLINLLEATYPNKRSPLCAYVLHLVELTGRASAMLTVHANRESGGPALNKTQAQTNHIITAFQNFEEHDNYAQVQPLTTISPYSTMHEDICSLAEEKRVSIIIIPFHKQQTVDGEMEDTIPAFRMVNHNLLQNSPCSVGILVDRGLNGSNRLIGNLASHQVVVLYFGGPDDREALAYGWRMSRHPRVRLTVMHFIPSLYSNQTSKSDHLWAKIDRSFTTIKNGNENKLDEEYISEFKMMVAHDDSVIYMDKVVNNGEETVAAIRSINNVNDLFIVGRGQGTMSPLTDGLTDWSECPELGAIGDLLASSDFETTASVLVLHQYVGQGPDGEDNFVVERPWESSELNQNINQQQYMQRYATPMETRHSFF* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2005 838 Gene3D - 42 440 IPR038770 -
Pvu6g2005 838 Pfam Sodium/hydrogen exchanger family 50 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu6g2005 838 PANTHER CATION/H+ EXCHANGER 3 10 835 - -
Pvu6g2005 838 PANTHER CATION/H + ANTIPORTER 10 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2005 Pvu-Chr6 30068078 30071015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2005 11 813 Antiporter Super Family AT2G13620 61.481 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2005 - - gmx:100800514 1370.14