Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1995 ATGGCTGACACCGCCGGCTCCGGTCACCGGCGAGTTATGACGCTCATCTCTTCCCTCGTCTCCCTCTCTCTTTCCATCAGAGTCTTCGCCGGAAAGTGGCAGCTTATTCGGAGCAGGCTGGAGGAGCTCTGTTCGGCACTCGTTGCCGGCGACTCCACTTCACTCTCAAGCGAGCTCCCGGCGATAAATGGCACGGTGGAGGAGTGCCACGAGCTGGCGAGGCGGTGCTTGGATCTGTCCTACAGCGGGAAGCTCTTGATGCAGAGCGACTTGGACCTGACTTTGGGGAAGTTGGAAGCGCACGTGAAGAAGCTATCCGAGATATTCAAGAAGCGTGTGTCGAGGCATGGCTACGCTGTTGTGGTTTCAAGGCCTGGTTTTGGAGCTGGCAAAGATGACATGAGGTTCTACTTAAGGGACTTAATGACTCGAATGAAGGTTGGTGATTTGGGAATGAGGAAGCAGGCATTGATGAACCTGCATGAGGTTGTTGTGGAGAATGATTTGTATGTGAAGTTGGTTGTTGATGTTTCTGAGTTTGTTCACTTGTTGGTGGATTTTCTGGGTTGTAATGAGGTTGAGATTGTTGAGGAGGCTGCGAAGGTTGTTTCTGTCGTTGCGGGTTTTGATTTTTGTAAAGGGGTTTTGGTTGGTGCTGGAGTTATTGGGCCTTTAATTCGGATTTTGGAATGTGGGAGTGAAGTGGGAAAGATTGCTGTTGTGAGGTGTCTGTGTAGACTGACCGAGAATTCGGATAATGCTTGGTGTGTTTCAGCTCATGGAGGTGTAACTGTCCTGTTTAGGATTTGTGAGAGTGCAGAGTGTAAAGGAGAATTGGTTGGTGCTGCTTGTGGGGTGTTGAGGAATCTTTGTGGGGTTGAGGAAATCAAGAGGTTTATGGTTGAGGAGGGCGTAGTTTCCACGTTTTTGAAGCTTGTAAGGTCTAAGGATGAAGTAGTTCAAGTTAGTTCTATTGAGTTGATTCAGAACATTGCCTCTGGTGATGAGTTAGTTAGGCAGATGGTGGTTAGAGAAGGAGGGGTTCGTGTTCTTTTGCGTGTTTTGGATCCAAAGTGGACGTGCTCGTCTAAAACAAGAGAGGTTGTGATGAGGGCTATTGAGAATTTGTGTTTTTCTTTGCCTAGTTGTGTTAGTCTTTTGCTGAGTTATGGCTTTGTGGATCACTTGATGTACTATGTTCGAAATGGGGAGGTATCGATTCAGGAGTTGGGGCTGAAGGTAGCGTTCAGATTGTGTGAAGCATCTGAGGAGGCCAAGAAGGCATTAGGTGATGCAGGGTTCATGGCCGAGCTTGTGAAGTTTCTAAATGCGAAATCGTTTGAAGTTCGTGAAATGGCAGCAGAGGCACTCTCTGGCATGGTTATGGTAGCTAAAAACAGGAAGAGGTTTGTGCAGGATGACCAAAGCATTGCCCTTCTCCTGCAATTGCTGGATCCAGGGGAGGGAAATTCTGGTAATAAAAAGTTGTTGATCTCTATTTTGATGTCACTAACAAGCTGCAACAGTGGCAGGAAGAAAATTGTGAGTTCCGGGTATGCCAAAAACATAGAGAGGCTTGCAGAAGCTGAGGTTTCTTCCGATGCCAAGAGGCTCGTCAGGAAGCTAGCCACAAACCGGTTCCGCAGTATGTTGAGTGGAATCTGGCACTCTTGA 1674 0.4779 MADTAGSGHRRVMTLISSLVSLSLSIRVFAGKWQLIRSRLEELCSALVAGDSTSLSSELPAINGTVEECHELARRCLDLSYSGKLLMQSDLDLTLGKLEAHVKKLSEIFKKRVSRHGYAVVVSRPGFGAGKDDMRFYLRDLMTRMKVGDLGMRKQALMNLHEVVVENDLYVKLVVDVSEFVHLLVDFLGCNEVEIVEEAAKVVSVVAGFDFCKGVLVGAGVIGPLIRILECGSEVGKIAVVRCLCRLTENSDNAWCVSAHGGVTVLFRICESAECKGELVGAACGVLRNLCGVEEIKRFMVEEGVVSTFLKLVRSKDEVVQVSSIELIQNIASGDELVRQMVVREGGVRVLLRVLDPKWTCSSKTREVVMRAIENLCFSLPSCVSLLLSYGFVDHLMYYVRNGEVSIQELGLKVAFRLCEASEEAKKALGDAGFMAELVKFLNAKSFEVREMAAEALSGMVMVAKNRKRFVQDDQSIALLLQLLDPGEGNSGNKKLLISILMSLTSCNSGRKKIVSSGYAKNIERLAEAEVSSDAKRLVRKLATNRFRSMLSGIWHS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1995 557 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 557 - -
Pvu6g1995 557 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 261 305 IPR000225 GO:0005515
Pvu6g1995 557 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 557 - -
Pvu6g1995 557 Gene3D - 138 547 IPR011989 -
Pvu6g1995 557 SUPERFAMILY ARM repeat 139 541 IPR016024 -
Pvu6g1995 557 SMART arm_5 250 292 IPR000225 GO:0005515
Pvu6g1995 557 SMART arm_5 335 378 IPR000225 GO:0005515
Pvu6g1995 557 SMART arm_5 209 249 IPR000225 GO:0005515
Pvu6g1995 557 SMART arm_5 422 462 IPR000225 GO:0005515
Pvu6g1995 557 SMART arm_5 293 333 IPR000225 GO:0005515
Pvu6g1995 557 SMART arm_5 167 208 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1995 Pvu-Chr6 29989885 29991808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1995 109 409 U-box Gene Family AT2G23140 23.102 1.13e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1995 - - gmx:100783537 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2279 2 38528587 38531172 Pvu6g1995 6 29989885 29991808 PCT