Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1989 ATGCAGACGAGGTACATGGAGAGATCGACCACCACGGCGGCGAGGGGGAAGCGCGGTTTAGATTCAGCTTCCACCGAAGAAGAACAACCTGAAAAAAAGCGACCTGCTCTCGCTAGCGTAATTGTTGAAGCCCTCAAGGTGGATAGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATTCTTCGTAGAGTTGTCAGCGAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTCACTGCCAAGAATAGTGGAAGGTCTTCTCCCAAGAGCATAGAAGGCCCTGATGACAGTACTCTACAGTTACAATTCAGGAACAGGTTATCCCTTCCCCTCTTTACTGGAGGGAAAGTGGACGGAGAGCAGGGCAACGCCATACACATTGTTTTGATTGATACAATAACAGGCCATGTTGTCACATCTGGCCCAGCTTCGTGTGTCAAACTAGATGTTATTGTACTTGAAGGAGATTTCAATAACGAGGATGATGAAAATTGGAGTGAAGAAGATTTTGATAGTCACGTAGTTAAAGAACGAGAAGGAAAAAGACCTCTTCTAGCTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTGGGTGAGCTTACATTTACAGACAACTCTAGTTGGATAAGGAGTAGGAAGTTTAGGCTGGGGCTCAAAGTTTCCTCAGATTGTTACGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAGCATTACCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAAAGGCTAAATAAAGCAGGAATATATACAGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTGCGGAATATTCTCGGGAGTGGTATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATATTATCCCGATGGGGCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTCTAATTACCAGTGACCAATATTACTCTGCTGATTCTCTCTCCGATAGTCAAAAGGTTTATGTGGACACACTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAATATGATGGCAAGTCTCTGCTAAATGCCAATCAGAACAAGACTTTGGGCGCCTCCCAACCTCTTCTGGCTCCAGTGGGTTCCCATGATTATTCAATTTCAAACTCACTTGATCAGCAGACCTCCATGCCAAATCTACCGGATCCTGTAACAACTGGGCAGCCTTCAATGGATCCAGCCATAACAGTCGGAGGTTATCATAATGCCACAACTATCAGGTCCTCAATGCAACCACAGAATGATGATCTTCATTCTTCTATTCAGTTTGATAACACTGCATTCCCACTGCAAAACCAGTTACTCAATGCTTCACACCAGTCTCAACTTCCTATAAATGAAAATGAGCTGACTCTTGGTTCACGACAACAACCAGCTACTCATGGCTTTCAGAATGTCAGCAATTCAAATCCTTGTTATAGAGGACTGGAGGACTACTTTCCAGAGGAGGAGATTCGAACTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGAATTTGCTTCGTATATTTAATATGGGAGGAGGGCAATCTCACGCTTCCTTCAATACCCCAGAAGATGCATACCCTTATTCATCTACTTACATGCCTGCGACCTCCATGGGCTACCACTTAGATGATGAACGAAACCGTTCCTCGGGAAAGGCTGTTGTGGGCTGGCTTAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCCGCTGAGAAACGGGCACAACTTGTTGAGTTGGATGACCCATAG 1917 0.4408 MQTRYMERSTTTAARGKRGLDSASTEEEQPEKKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVECALAKLVTAKNSGRSSPKSIEGPDDSTLQLQFRNRLSLPLFTGGKVDGEQGNAIHIVLIDTITGHVVTSGPASCVKLDVIVLEGDFNNEDDENWSEEDFDSHVVKEREGKRPLLAGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCYEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDGARNVGVVFNNIYELSGLITSDQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLNANQNKTLGASQPLLAPVGSHDYSISNSLDQQTSMPNLPDPVTTGQPSMDPAITVGGYHNATTIRSSMQPQNDDLHSSIQFDNTAFPLQNQLLNASHQSQLPINENELTLGSRQQPATHGFQNVSNSNPCYRGLEDYFPEEEIRTRSHEMLENEDMQNLLRIFNMGGGQSHASFNTPEDAYPYSSTYMPATSMGYHLDDERNRSSGKAVVGWLKLKAALRWGIFIRKRAAEKRAQLVELDDP* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1989 638 MobiDBLite consensus disorder prediction 1 35 - -
Pvu6g1989 638 PANTHER OS02G0177800 PROTEIN 1 636 IPR012416 GO:0005516
Pvu6g1989 638 Pfam Calmodulin binding protein C-terminal domain 328 390 IPR046829 -
Pvu6g1989 638 Pfam Calmodulin binding protein-like N-terminal domain 98 245 IPR046831 -
Pvu6g1989 638 PANTHER CALMODULIN-BINDING PROTEIN 1 636 - -
Pvu6g1989 638 MobiDBLite consensus disorder prediction 20 34 - -
Pvu6g1989 638 Pfam Calmodulin binding protein central domain 257 323 IPR046830 -
Pvu6g1989 638 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1989 Pvu-Chr6 29936272 29941943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1989 6 633 Calmodulin-binding Proteins AT5G57580 59.538 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1989 - - gmx:100802994 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2292 2 38716518 38721907 Pvu6g1989 6 29936272 29941943 PCT