Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1919 ATGATCAGACACCAGCAGAAACACACATCCCCTCTTCCACCACTTCTACTGATTCTTCTCTTTTTCAACTTCACATGTGCCATTGATTTCGTCTTTAATGGCTTCAACTCCTCTGAAGTATTGCTCTTTGGAAACGCCACCATTGATTCTCGAATTCTAACACTGACACACCATCAAACTTTCTCCATCGGTCGTGCCTTGTACAGGGAAAAAATTCCCACCAAGAGACCAAACTCTTCTTTTGTGTACCCTTTCTCCACCTCTTTCATCTTTGCCATGGCACCTTATGAAGACACTCTTCCAGGGCATGGCTTGGTTTTCATCTTTACACCTGTCACGGGCATCCAAGGCACAAGTTCTGCACAACACCTTGGTCTTTTCAACCTCACCAACAACGGAAACTCAAGCAACCATGTGCTTGGTGTTGAGTTCGACGTGTTCATGAACCAAGAGTTCGATGACTTCAACGCCAATCATGTGGGGATTGACATAAACTCTCTCAAGTCTTTTGTTTCCAATGATTCTGGGTATTGGCAAGATGATGGTGACAAGTCCTTTAAGGAGTTGACGCTTAACAACGGTGAGAATTACCAAGTTTGGATTGACTATGAAGATTCTTGGATGAATGTTACCATGGCACCGGTTGGTATGAAAAGGCCTAGTAGGCCTTTGTTGAATGTTTCTCTCAACTTATCTGAGGTTTTTGAGGATGAAATGTTCGTTGGGTTTACTAGTGCCACTGGTCAATTAGTTCAGAGTCACAAGATTTTGGGGTGGAGTTTCAGCAATGATAATATTTCGTTGAGTGATGAACTTATTACTACTGGGTTACCATCTTTTGTTCTTCCAAAAGATTCAATTTTTAAGTCCAAGGGGTTTGTTGCAGGGTTTACTGTTGGAGTTTTCTTGGTTATTTGTGTCTTGGTATTGTTGGCACTGTTCTTGATTCAGTGGAAGCGTAGGAGAGAGAGGAAGAGGCAGGAAATGGAAGATTGGGAGTTGGAGTATTGGCCACACAGAATGGCGTATGAAGAAATTGAGGCAGCAACAAAGGGGTTCTCTGAGGAGAATGTGATTGGGGTTGGTGGGAATGGGAAAGTCTACAAGGGTGTTCTAAGAGGAGGGGTGGAGATTGCTGTGAAGCGCATTTCTCATGAAAATGATGGCGTGCGAGAATTTCTTGCTGAAGTTTCAAGCCTTGGAAGACTGAAGCAAAGGAATTTGGTGGGGTTGAGAGGTTGGGGCAAGAAAGATGTTGGGGTTTTCTTCTTAGTCTATGACTACATGGAAAACGGTAGCTTGGACAAGAGGGTGTTTGATTGTGATGAGAGGAAGATGTTGAGTTATGAAGACAGGATAAGGATCATCAAAGATGTGGCTTTTGCAGTTTTGTACTTGCATGAGGGGTGGGAAGCTAAGGTTGTGCACAGGGACATTAAGGCCAGCAATGTTTTGCTTGATAAGGATATGAACGGAAAGCTTGGGGATTTCGGGTTAGCCAGAATGCACAGCCATGGTCAAGTTGCTAGCACCACCAAATTGGTTGGAACAGTGGGGTACATGGCTCCCGAAATGTTCAAGACTGGAAGAGCTTCCACTCAGACAGATGTTTACATGTTTGGTATCTTGATTCTAGAGGTTTTGTGTGGAAGGAGACCTCTAGAAGAAGGTAAGGTAGGTTTGGTGGAGTGGGTTTGGCAACTAATGGTACAAGGGCAAATTGTTTTTGCACTTGATGAAAGATTAAGGGCCAAGGGAGAGTTCAGTGAGCAAGAGGTGGAGAGGTTAATGCACTTGGGTTTGTTGTGTGCCTACCCTGAACCAAAGGCCAGGCCCACAATGAGACAAGTGGTGAATGTTCTAGAGGGGAAGAAAGAGGTCGATGATTCAGAAATTGAGAATATGGATAGTTATTTGCTCCAACAGTTGAAATCAAGGGATATATTGTCTGAGTATTCCCAATACTTTAGCTTTGCCTCACACCCAACTTTTCAAGATATTCGCATCTCTTCCTCAATATCTCTTACTTGGTCCGAATCTGTTGTTGAGGGTCCATTCGAGATGACAACTCTAGAATGA 2079 0.4358 MIRHQQKHTSPLPPLLLILLFFNFTCAIDFVFNGFNSSEVLLFGNATIDSRILTLTHHQTFSIGRALYREKIPTKRPNSSFVYPFSTSFIFAMAPYEDTLPGHGLVFIFTPVTGIQGTSSAQHLGLFNLTNNGNSSNHVLGVEFDVFMNQEFDDFNANHVGIDINSLKSFVSNDSGYWQDDGDKSFKELTLNNGENYQVWIDYEDSWMNVTMAPVGMKRPSRPLLNVSLNLSEVFEDEMFVGFTSATGQLVQSHKILGWSFSNDNISLSDELITTGLPSFVLPKDSIFKSKGFVAGFTVGVFLVICVLVLLALFLIQWKRRRERKRQEMEDWELEYWPHRMAYEEIEAATKGFSEENVIGVGGNGKVYKGVLRGGVEIAVKRISHENDGVREFLAEVSSLGRLKQRNLVGLRGWGKKDVGVFFLVYDYMENGSLDKRVFDCDERKMLSYEDRIRIIKDVAFAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGKLGDFGLARMHSHGQVASTTKLVGTVGYMAPEMFKTGRASTQTDVYMFGILILEVLCGRRPLEEGKVGLVEWVWQLMVQGQIVFALDERLRAKGEFSEQEVERLMHLGLLCAYPEPKARPTMRQVVNVLEGKKEVDDSEIENMDSYLLQQLKSRDILSEYSQYFSFASHPTFQDIRISSSISLTWSESVVEGPFEMTTLE* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1919 692 Gene3D - 26 271 - -
Pvu6g1919 692 SMART serkin_6 353 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1919 692 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 16 676 - -
Pvu6g1919 692 Gene3D Transferase(Phosphotransferase) domain 1 429 645 - -
Pvu6g1919 692 Gene3D Phosphorylase Kinase; domain 1 315 428 - -
Pvu6g1919 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Pvu6g1919 692 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Pvu6g1919 692 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1919 692 Pfam Legume lectin domain 28 266 IPR001220 GO:0030246
Pvu6g1919 692 CDD lectin_legume_LecRK_Arcelin_ConA 28 262 IPR001220 GO:0030246
Pvu6g1919 692 SUPERFAMILY Protein kinase-like (PK-like) 329 622 IPR011009 -
Pvu6g1919 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 271 IPR013320 -
Pvu6g1919 692 Coils Coil 315 335 - -
Pvu6g1919 692 Pfam Protein kinase domain 354 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1919 692 PANTHER - 16 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1919 Pvu-Chr6 29394005 29397168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1919 23 577 Receptor kinase-like Gene Family AT4G04960 67.321 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu6g1919 Pkinase 5.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1919 - - gmx:100804391 1202.58