Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1916 ATGGGGGAAGATAGTTATTCTTGGATTAGGAGAACAAAGTTTTCACACACAGTGTGCCATCGTTTGGATCCATCTAGATTAGGTCATGTTCCTATCAGCATTCAGTCAGAGCAAAAATCAAGGCCCGCCCCACAGGCTCAGAGGCACCCCATAACGAACAAGCAGAGATCTTTGTCACCATTGCCAGAGACTTTTCTTTCTGAGGCCTTCAGGGAAGCTAAACATGATCAGAGGAGGTTCTCCACACCGAATCCCCAGAGAGGTAATAGGGTTATGAACAAAGATTCTGGGGAGACTAAGGAATCAAGTTCAAAGTTGCCTTCCCCCCGTAGTCCAAATAGGCAGGTGAAGTCAAAGCACAACAAGGATGCAGCATGGACTAAGTTTTTGGATAATGGTGGAAGCAAGATTACTGCTATCGAAACAGCTGAAGAGTGGAATATTGACATGTCTCAACTGTTTTTTGGCCTAAAGTTTGCTCATGGAGCACATAGCCGACTTTACCATGGTGTATATAAGGATGAATCAGTTGCTGTTAAAATCATTATGAAACCCGAAGACGATGAAAGTGGAGATTTGGCTTGTCGATTAGAGAAACAGTTCGTTAGAGAAGTTACCCTTTTATCTCGCCTTCACCATCAAAATGTTATAAAGTTCTCAGCAGCATGCAGAAAGCCACCTGTTTATTGCATCATCACAGAGTATCTTTCGGAAGGTTCCTTGAGGGCATATTTGCATAAGTTGGAGCGCCAAACTATTTCTCTAGAAAAACTATTAACTTTTGCCCTGGATATTGCTCGCGGTATGGAATATATACATTCTCAAGGTGTCATTCATCGAGACCTTAAGCCAGAGAATATCCTCATCAACGAAGACTATCGCCTTAAAATTGCTGATTTTGGCATTGCATGCGAGGAAGCCTCTTGTGACTTATTGGCTGATGACCCTGGCACCTACCGTTGGATGGCACCCGAGATGATCAAACAGAAATCCTATGGGAAAAAGGTTGATGTCTACAGTTTTGGGCTTATCTTATGGGAGATGTTGACTGGAACTATTCCATATGAGGACATGAATCCAATACAGGCTGCTTTTGCCGTTGTAAACAAGAATTCAAGGCCAGTTATTCCATCAGACTGTCCACCTGCTATGCGAGCTTTAGTTGAGCAATGTTGGAGCCTGCAACCAGATAAGAGGCCTGAGTTCTGGCAGATTGTGAAGATATTAGAGCAATTTGAATCTGCACTTGCCCGTGATGGAACCCTGAGTCTGGTGCCAAACCCTTGTTGGGATACTAAAAAAGGGGTTCTTCATTGGATTCAAAAGCTTGGTCCTGTGCAACAAAATAGTGGCCCTGTGCCTAAACCCAAGTTCACATGA 1380 0.4355 MGEDSYSWIRRTKFSHTVCHRLDPSRLGHVPISIQSEQKSRPAPQAQRHPITNKQRSLSPLPETFLSEAFREAKHDQRRFSTPNPQRGNRVMNKDSGETKESSSKLPSPRSPNRQVKSKHNKDAAWTKFLDNGGSKITAIETAEEWNIDMSQLFFGLKFAHGAHSRLYHGVYKDESVAVKIIMKPEDDESGDLACRLEKQFVREVTLLSRLHHQNVIKFSAACRKPPVYCIITEYLSEGSLRAYLHKLERQTISLEKLLTFALDIARGMEYIHSQGVIHRDLKPENILINEDYRLKIADFGIACEEASCDLLADDPGTYRWMAPEMIKQKSYGKKVDVYSFGLILWEMLTGTIPYEDMNPIQAAFAVVNKNSRPVIPSDCPPAMRALVEQCWSLQPDKRPEFWQIVKILEQFESALARDGTLSLVPNPCWDTKKGVLHWIQKLGPVQQNSGPVPKPKFT* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1916 459 MobiDBLite consensus disorder prediction 36 62 - -
Pvu6g1916 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 436 - -
Pvu6g1916 459 SUPERFAMILY Protein kinase-like (PK-like) 138 409 IPR011009 -
Pvu6g1916 459 Gene3D Transferase(Phosphotransferase) domain 1 238 422 - -
Pvu6g1916 459 ProSiteProfiles Protein kinase domain profile. 153 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1916 459 Pfam Protein tyrosine and serine/threonine kinase 158 409 IPR001245 GO:0004672|GO:0006468
Pvu6g1916 459 CDD STKc_MAP3K-like 160 409 - -
Pvu6g1916 459 SMART serkin_6 153 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1916 459 Gene3D Phosphorylase Kinase; domain 1 141 237 - -
Pvu6g1916 459 MobiDBLite consensus disorder prediction 36 124 - -
Pvu6g1916 459 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 436 - -
Pvu6g1916 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Pvu6g1916 459 PRINTS Tyrosine kinase catalytic domain signature 233 246 IPR001245 GO:0004672|GO:0006468
Pvu6g1916 459 PRINTS Tyrosine kinase catalytic domain signature 271 289 IPR001245 GO:0004672|GO:0006468
Pvu6g1916 459 PRINTS Tyrosine kinase catalytic domain signature 317 327 IPR001245 GO:0004672|GO:0006468
Pvu6g1916 459 PRINTS Tyrosine kinase catalytic domain signature 336 358 IPR001245 GO:0004672|GO:0006468
Pvu6g1916 459 PRINTS Tyrosine kinase catalytic domain signature 380 402 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1916 Pvu-Chr6 29369763 29373270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1916 1 459 MAP Kinase Kinase Kinase AT5G58950 52.751 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pvu6g1916 PK_Tyr_Ser-Thr 4.7e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2360 2 39459783 39464317 Pvu6g1916 6 29369763 29373270 PCT