Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1912 ATGAAGTTCAACATTGCGAATCCGACCACCGGTTGTCAGAAGAAGCTGGAAATCGATGACGACCTTAAGCTACGAGCATTTTGGGACAAGAGGATCTCTCAAGAGGTTCTTGGTGATGCTTTGGGCGAGGAATTCAAAGGCTATGTCTTCAAAATCACTGGAGGATGTGATAAGCAAGGATTTCCAATGAAGCAGGGAGTGTTGACCCCTGGCCGTGTTCGTCTCCTGCTGCACAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAGCGCAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAATTTGGTAATTGTAAAGAAGGGTGAAAATGATTTACCAGGCCTGACAGATGTTGAAAAGCCAAGGATGAGGGGTCCAAAGAGAGCTTCCAAAATTCGCAAGCTGTTCAACTTGTCTAAGGATGATGATGTCAGGAAGTATGTCAACACATATAGGAGAACATTTACAACTAAAGCTGGGAAAAAGGTGAGCAAGGCTCCTAAAATACAACGTCTGGTCACTCCCCTAACCCTCCAAAGAAAGAGAGCAAGGATCGCAGATAAGAAGAAGAGAATTGCTAAAGCAAAATCAGAGGCAGCAGAGTACCAGAAACTTCTGGCCTCCAGATTGAAGGAGCAGAGAGAACGCCGGAGTGAGAGCTTGGCCAAGAGAAGATCAAAACTTTCCAGTGCCACTAAACCAGCTGCCACAGCATAA 750 0.4667 MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSATKPAATA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1912 249 MobiDBLite consensus disorder prediction 220 249 - -
Pvu6g1912 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pvu6g1912 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 249 - -
Pvu6g1912 249 Coils Coil 189 216 - -
Pvu6g1912 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 249 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pvu6g1912 249 Gene3D - 133 234 - -
Pvu6g1912 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
Pvu6g1912 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pvu6g1912 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Pvu6g1912 249 MobiDBLite consensus disorder prediction 220 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1912 Pvu-Chr6 29334241 29337322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1912 1 248 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.888 1.33e-118 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1912 K02991 - gmx:100786559 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2369 2 39570120 39572565 Pvu6g1912 6 29334241 29337322 PCT