Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1885 ATGAACCATGTGGAGCATATCGCTTATGACATGGTCATGATCACTCTCTCCATATCTCTGATCGTTCTTGGCATCATCCTCTTCCTCGCTTGCAAGAAGAAACCCGTTGAATCCGAAGAAACCCTTCCCGTGAAGCTGTGTGCTCGTGCATACCCCTTGATGGAAGTTGATGCCGCCACCGGTGGCTTCAACCATAGGAGAATCATTGGGCAGGGTCGCTTAGGAACTGTGTATGCAGGGACACTGGAGAAAGAAGAGCTTGTAGCTGTTAAAAGGATTCACCCCGTTCTTGTGTTGAGCAATGCAGGGTTTGGTTTCTCATCCGTGTTGAAATGGCTCTCCTTGGCCCAACACCCCAACGTAGTTCCAATAATAGGGTTCTCAGAAGCACCTGGTGAGAGAGTTATTCTGATGGAGTTTGTGCACATGGCAAGCTTGGACTTCTACTTGCATCAAAACCAAGATGGGGCTTCACTTTTGGATTGGAACAAGAGGTTCAGGATTGCAGCTGGAGCAGCCAGAGGGCTTCAATACCTGCATGAAGTGGTGGCGCCAAACATTGTACATGGGTGTGTTAAGTCCTCTAATATTCTCATTGATGTCAACTTCTGTGCAAGGATTTCTGATTACGGGCTTAACTTTTTGGCACCTGTGGAAAAGAGAGGGCTAGTGGGGTATGTGGATGATGAATATTGGAGTGAAAGAAGGGGTGGTGGAGCTACCAAGGAGAGTGATGTTTATGGGTTAGGGGTGATCCTGCTGGAGCTTTTAACTGGGAAAGGGTGTGAGGGAGGGTTGTTGGTGAAGTGGGCATTGCCTTTGATTAGAGAAACAAGTTTTAGTGAACTTTTGGATCCTAGGTTGGTCATTCCTTCTGACACCAAGCCTCTGGTTAGGTTAGCCAAAGTTGCTTCAGCATGTGTTGGTAACTCACGAAAATGTAGACCTTCTGTGGCTCAAGTGGCAACCATTTTGAACAATTTAGAAACTGAACTGTGTCTCTGA 1005 0.4687 MNHVEHIAYDMVMITLSISLIVLGIILFLACKKKPVESEETLPVKLCARAYPLMEVDAATGGFNHRRIIGQGRLGTVYAGTLEKEELVAVKRIHPVLVLSNAGFGFSSVLKWLSLAQHPNVVPIIGFSEAPGERVILMEFVHMASLDFYLHQNQDGASLLDWNKRFRIAAGAARGLQYLHEVVAPNIVHGCVKSSNILIDVNFCARISDYGLNFLAPVEKRGLVGYVDDEYWSERRGGGATKESDVYGLGVILLELLTGKGCEGGLLVKWALPLIRETSFSELLDPRLVIPSDTKPLVRLAKVASACVGNSRKCRPSVAQVATILNNLETELCL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1885 334 ProSiteProfiles Protein kinase domain profile. 63 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1885 334 PIRSF ILK 29 333 - -
Pvu6g1885 334 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 333 - -
Pvu6g1885 334 Gene3D Transferase(Phosphotransferase) domain 1 142 332 - -
Pvu6g1885 334 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Pvu6g1885 334 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 333 - -
Pvu6g1885 334 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
Pvu6g1885 334 Pfam Protein tyrosine and serine/threonine kinase 66 323 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1885 Pvu-Chr6 29104591 29105595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1885 48 332 Receptor kinase-like Gene Family AT3G59420 38.462 4.34e-53 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pvu6g1885 PK_Tyr_Ser-Thr 1.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1885 - - vun:114187437 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2397 2 39860936 39861934 Pvu6g1885 6 29104591 29105595 PCT