Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1877 ATGGAAAAGATGGATGTTGAAGAGTTGTTTCAGGCTCAGGCTCATTTATACAACTATACTTATAGTTTCATTGGTTCCATGTGCCTCAAAAGTGCAGTTCACTTGGGAATACCAGACATAATCTTCAAGAATGCCAAACCTATTACTCTCCCTGAGTTGGTTTTGGCACTTCAGATTCAACCAACAAAATCTGGTCATGTATATAGGCTCATGCGCTTGCTGGTGCATGCAGGTTTCTTTGCCACAACCAAGGTTGTGAAAGATGATAAGGAAGAAGTGGGGTATGATCTCACACCTTCCTCGAGGCTACTCCTTAAGGACAATGTTCCAACCCTGTCTCCTTTTGTTCGAGCAATGTTTCATCCGGCTTTGATTCACTCATCAGAATCCTTGGCAGAGTGGTTTCACAGCAAGGAGATCACACCCTTTGACAGCGCTTTTGGCATGAGTTTCTGGGAGTATTGGGGTCAGAACCAAGAGTTTAACGGCCTCTTCAATGAAGCAATGATCAGTGATTCCGGGATGGTGAATCTGGTTATGAGAAACTGTAAATCTGTTTTTGAGGGACTGAGTTCATTGGTTGATGTTGGTGGTGGCAAAGGAGGTGTAGGTAGGATAGTTTGTGAGTCACTGCCTAATTTGCATTGGACCGTGCTTGATCTTCCACATGTGGTTGAAAATTTGCCTGACAGTACCAATTTGAAGTTTGTTGGAGGTGACATGTTTCAGTCCATTCCTTCAGCAGATGCCATTCTTCTTAAGTTAGTATTGCATGCTTATAGCGATGAAGAGTCCATTAAGGTACTGAAGAAATGCAAAGAAGCTATTTCAAAGAAGGGGAAGGAAGGGAAAGTGATTATCATAGACATAGTGGTTGGTGAAAAGAATGAAAATCATGTATTGACCGAAGCAAAGCTGTTTTATGATATGCTAATGATGGTTGTGGTGACTGGGAGAGAGAGAGAAGAAAAAGAATGGGAGAAACTCTTCTTGGAAGCTGGATTCAGTCATTACAAGATAACAAACATATTTGGTTTGAGATCGCTTATTGAAGTTTATCCTTGA 1065 0.415 MEKMDVEELFQAQAHLYNYTYSFIGSMCLKSAVHLGIPDIIFKNAKPITLPELVLALQIQPTKSGHVYRLMRLLVHAGFFATTKVVKDDKEEVGYDLTPSSRLLLKDNVPTLSPFVRAMFHPALIHSSESLAEWFHSKEITPFDSAFGMSFWEYWGQNQEFNGLFNEAMISDSGMVNLVMRNCKSVFEGLSSLVDVGGGKGGVGRIVCESLPNLHWTVLDLPHVVENLPDSTNLKFVGGDMFQSIPSADAILLKLVLHAYSDEESIKVLKKCKEAISKKGKEGKVIIIDIVVGEKNENHVLTEAKLFYDMLMMVVVTGREREEKEWEKLFLEAGFSHYKITNIFGLRSLIEVYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1877 354 PANTHER ASMT2 4 354 - -
Pvu6g1877 354 Gene3D - 1 104 IPR036388 -
Pvu6g1877 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Pvu6g1877 354 SUPERFAMILY "Winged helix" DNA-binding domain 7 108 IPR036390 -
Pvu6g1877 354 Pfam O-methyltransferase domain 130 336 IPR001077 GO:0008171
Pvu6g1877 354 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Pvu6g1877 354 PANTHER O-METHYLTRANSFERASE 4 354 IPR016461 GO:0008168
Pvu6g1877 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
Pvu6g1877 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 353 IPR029063 -
Pvu6g1877 354 Gene3D Vaccinia Virus protein VP39 105 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1877 Pvu-Chr6 29034073 29035468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1877 27 352 Monolignol Biosynthesis Gene Families AT5G54160 34.524 9.92e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1877 K22588 - qsu:112018723 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1877 6 29034073 29035468 Pvu6g1877 6 29034073 29035468 ECH