Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1875 ATGAAGAAAATTTCCAAGAGCACCTGCAAATCAGCATCACACAGGCTCTTTAAAGACAAGGCAAGGAACCATGTTGATGATCTACAGGTCATGTTCTTGGATCTGCAGTTTGCCAGAAAGGAGAGCCGCACGATTGATGTGGCACTCCTGGAGGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAGCCTTCTCCAGCTTCTTCTCTGCAGCAAGGTGGTAGTCTTGGTTCATTCTCGACCGATGTCTATAGGCTGTTGCAGCTCTGTGAGGAGGAAGATGATGCTACTAGTCCATTAGTTGCACCTAAGCCTGAACCTAATGATCAGACTATGCAGGCTGGAGCTAGGGTGATAGTCCAAGAGGGCCAACATGAACAAGAATTCCTATTACTTAAAGAATGCAAACACTCCGCTATAGGAGTTCCCAACATGCCAGCTCACAACTTGGATGGACCTGCTTTAGAATTTCATCAACTTGAATTCAATAAGGACTTCGATCACAGCTTTTACGGTGGTACAGGATTTTGTGAGGAAGGTGGTGGTCCTCATATATCTAGCTATCTTCCAAGTGTGTGTCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGCGCACTTTGGGACTGTCCAAGACCTGTTCAAGGGTTGGATTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGCATGACCCCAGTTCTAAGACCTGGGGGAATAGGACTCAAGGATAATTTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAATGCACCTGAACTCTTTGATATTTGTGTTCTGGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTAGAAGGGCATTTGAGAGTGGAAACAGAAAGCAGAGATCGCTGCCGGATTATAGCGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAACCTCTAAACCTTTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGTGATGCATGTGCTTTATATCGGTTAGAACTGAAGCTTGTTGATGGGAAAAAGAGCTCAAAGGCAAGGATAATAACAGGTGATTCGGTTGCTGATCTTCAGAAGCACATGGGAAGCCTCTCTGCTGAGTTTCACTCTGATAGTAACAAACGGTCTGCCAAAGGTAGTAGAACCAAGCTTGGCATAGGAGGTGGTGTTTATTCAGCTTCTAACAGAGTTGCTCTACTAAATGCACCTTATCAATACGGCTTAACTGCACCATATGACTTTGTTGCTGACAACACAAGGGACTATATGTGA 1419 0.4496 MKKISKSTCKSASHRLFKDKARNHVDDLQVMFLDLQFARKESRTIDVALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVAPKPEPNDQTMQAGARVIVQEGQHEQEFLLLKECKHSAIGVPNMPAHNLDGPALEFHQLEFNKDFDHSFYGGTGFCEEGGGPHISSYLPSVCPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFSALSAKAQGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDACALYRLELKLVDGKKSSKARIITGDSVADLQKHMGSLSAEFHSDSNKRSAKGSRTKLGIGGGVYSASNRVALLNAPYQYGLTAPYDFVADNTRDYM* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1875 472 PANTHER TRANSCRIPTION FACTOR VOZ1 1 471 IPR039277 GO:0006355|GO:0048578
Pvu6g1875 472 PANTHER TRANSCRIPTION FACTOR VOZ1 1 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1875 Pvu-Chr6 29022556 29026217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1875 3 471 VOZ-9 Transcription Factor Family AT1G28520 66.462 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pvu6g1875 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1875 - - gmx:100784593 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1875 6 29022556 29026217 Pvu6g1875 6 29022556 29026217 ECH
Pvu6g1875 6 29022556 29026217 Pvu3g0763 3 11332280 11337938 ECH