Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1874 ATGGGGAAAAGGAAGGCAAAGGCAAAGCCTGCTCCAAAGAAACGAATGGATAAGCTTGATACTGTCTTCAGCTGCCCTTTCTGCAATCATGGCAGCAGTGTTGAATGCCGCATTGACATGAAGAATTTGATAGGAGAAGCTACATGCGGAATATGCCAAGAGAGTTTTAGCACTACCATCACAGCTTTATCAGAGGCAATAGACATATATAGTGAGTGGATTGATGAATGTGAAAGGGTGAACACTGTGGATGATGATGCATAG 264 0.4318 MGKRKAKAKPAPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSTTITALSEAIDIYSEWIDECERVNTVDDDA* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1874 87 Gene3D - 16 82 IPR038567 -
Pvu6g1874 87 PANTHER UNCHARACTERIZED 1 86 IPR007808 -
Pvu6g1874 87 Pfam Transcription elongation factor Elf1 like 2 78 IPR007808 -
Pvu6g1874 87 SUPERFAMILY Zinc beta-ribbon 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1874 Pvu-Chr6 29015187 29017556 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu6g1874 Elf1 1.1e-30 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1874 K25829 - csv:101220299 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1874 6 29015187 29017556 Pvu6g1874 6 29015187 29017556 ECH
Pvu6g1874 6 29015187 29017556 Pvu3g0762 3 11316807 11318836 ECH