Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1870 ATGGACCAACAACATAAAGTGATGATTCTTCTTCAGCTGCTTCTTTTCCAAGTTCTGTTTGTTGCATCACAGACAGACAGTCGAGATTATTCTGGCCTAAATTCCCTTGCAGAATCCTGGAGTAGCAAGCCACAGAGTTGGGTGGGTACTGATCCTTGCAGTAGCTGGGATGGAATTCGTTGCAGCAATACAAGAATTACCGAATTGAGACTTCCAAGCTTGAGTTTGAGGGGCCAACTGTCTTCAGCAATTGAGTCTTTATCTGAACTAGTTACTCTGGATCTTTCTTACAACACGGGTTTGACAGGAACAATTCCAAATGAAATTGGGAATCTGAAAAGGCTAAAATCCCTATCATTGGTTGGTTGTGGTTTCTCTGGTCCTATTCCGGATTCAATAGGATCTTTAAAGCAGCTGACCTTTCTAGCATTGAACTCTAACAAGTTCAGTGGAACTATACCACGCTCTCTTGGCAATCTAACAAATATCAATTGGCTTGATCTTGCTGAAAACGAGCTTGTAGGGACCATTCCTGTCTCTGATAACCAAGGACGACTAGGCCTTGACCTGCTCCTTAAGGCACAACACTTTCATATGGGGAGCAATAATCTCACTGGTACAATACCAGAAAAACTTTTCAACTCCAGTATGATTCTAGAACACGTGCTTTTTGACCACAATCAACTAGAGGGTAGTGTTCCTTTATCCATTAGTTCTGTGGGGACATTGGAAGTTCTGCGCTTAGATAAGAATGGATTAACAGGGGCAGTGCCGGCAAACCTAAGCAAACTCGGAAAACTAAGTGAGATCTATTTATCTCACAATAAGTTCAATGGCACTTTGCCCGATTTTACCGGAATGAATAGTCTCACCTACGTGGACTTGAGCGACAATACTTTCAGTGCCTCTAATGTTCCTTCATGGGTTACAAGTCTGCCGGTTCTGACAACAGTGATACTTGGGCAGAACCACCTCGGTGGCACACTAAATCTTAGTGGCCACAGCCAAAGTCTGGAACAAATAAATTTGGAGAATAATGACATAACAGAGATTGACCCAGAAAGCAATCTACCAAGTATCGAAATAAGACTAGCTAACAACCCAATTTGTCGTGAAAGTGGAGCATCTGAAAAGAGTTACTGCCAACAACCAGTATCAAATCCCTCATTTTATTCAACACCATCAAATAATTGTTCTCCTCCACCTTGCAGTTCCGATCAGATTGCCAGCCCAAATTGTAACTGTGCATTTCCCTATACTGGACTTCTTATATCGAGAGCTCTTAGTTTCTCAAACTTCAGTGACGCAAAGTACTACAGGGAGATTGAGCAGTCTCTGATGGATACTTTCCGAAACAAAAGCATTCCAGTGGATTCAGTTGCTCTTAGTAACCCCGTGAGAAATCCTACTTCTGATAACTTTGAATTGAATCTGCAAGTCTTCCCTTCGCAAAGCGATCGCTTCAATGCAACTGGAATTTTAAATATTGCTTTTCTGCTTAGCAACCAAATTTATAAACCTCCAGAGTTCTTCTCCCCTTACTACTTCAATGGTGCTAGTTATGAATACACAGCAGGTGAACCAAAAGGATCAAAGTCATCACATACCGGGATTATAGTTGGTGCTGTAGTTGCTGTTGTGGTCTTTGTTGTACTAGCATCCCTTGCAGGGATGTATGCCATTCGCCAGAAAAGAAGAGCAGAAAGATCTGCGGGGCTGAACCCTTTTGCCAATTGGGAACAGAATAAGAATAGTGGCACTGCTCCTCAGTTGAAAGGAGGACGATGGTTTGCTTTTGATGAACTAAGGAAATACACCAACAACTTCTCAGAAGCCAATACTATTGGATCTGGAGGCTATGGACAGGTTTACCAAGGAACTCTTCCCTCTGGAGAGTTGGTTGCTATCAAACGGGCTGCAAAAGAATCTATGCAGGGTGCTGTTGAGTTTAAAACCGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTCGTTAGTCTTCTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGTACATTCCAAATGGCACTTTAATGGATAGTCTCTCAGGAAAGTCTGGGATCTGGATGGATTGGATAAGGAGGCTTAAAGTAACATTAGGTGCAGCCAGGGGTCTGGCCTATCTTCATGAACTTGCTAACCCACCAATCATACACAGGGACATCAAATCTAGCAATATCTTACTTGATGATCACCTCATTGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTATATGACCCAGCAGTTAACTGAAAAGAGTGATGTATATAGCTTTGGAGTGCTAATGCTGGAACTAGCAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTATATTGTAAGAGAAGTGATGAGGGTAATGGACACATCAAAAGATTTATACAACCTTCATTCCATTATAGATCCAACTATATTGAAAACAAGACCAAAAGGTTTAGAAAAGTTTGTGATGTTGGGAATGAGATGTGTCAAAGAATATGCAGCTGAGAGGCCTACAATGGCTGAGGTTGCAAAAGAGATTGAGAGCATAATCGAGCTTGTTGGATTGAACCCCAATGCTGAATCAGCTACAACATCAGAAACTTATGAGGAAGCAGGTAAAGAAAATGCCCAACATCCTTACAAGGAAGAAGATTTTAGCTATAGTGGAATATTTCCATCAACAAGGGTAGAACCCCAATAG 2793 0.4171 MDQQHKVMILLQLLLFQVLFVASQTDSRDYSGLNSLAESWSSKPQSWVGTDPCSSWDGIRCSNTRITELRLPSLSLRGQLSSAIESLSELVTLDLSYNTGLTGTIPNEIGNLKRLKSLSLVGCGFSGPIPDSIGSLKQLTFLALNSNKFSGTIPRSLGNLTNINWLDLAENELVGTIPVSDNQGRLGLDLLLKAQHFHMGSNNLTGTIPEKLFNSSMILEHVLFDHNQLEGSVPLSISSVGTLEVLRLDKNGLTGAVPANLSKLGKLSEIYLSHNKFNGTLPDFTGMNSLTYVDLSDNTFSASNVPSWVTSLPVLTTVILGQNHLGGTLNLSGHSQSLEQINLENNDITEIDPESNLPSIEIRLANNPICRESGASEKSYCQQPVSNPSFYSTPSNNCSPPPCSSDQIASPNCNCAFPYTGLLISRALSFSNFSDAKYYREIEQSLMDTFRNKSIPVDSVALSNPVRNPTSDNFELNLQVFPSQSDRFNATGILNIAFLLSNQIYKPPEFFSPYYFNGASYEYTAGEPKGSKSSHTGIIVGAVVAVVVFVVLASLAGMYAIRQKRRAERSAGLNPFANWEQNKNSGTAPQLKGGRWFAFDELRKYTNNFSEANTIGSGGYGQVYQGTLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVSLLGFCFEKGEQMLVYEYIPNGTLMDSLSGKSGIWMDWIRRLKVTLGAARGLAYLHELANPPIIHRDIKSSNILLDDHLIAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATARRPIEQGKYIVREVMRVMDTSKDLYNLHSIIDPTILKTRPKGLEKFVMLGMRCVKEYAAERPTMAEVAKEIESIIELVGLNPNAESATTSETYEEAGKENAQHPYKEEDFSYSGIFPSTRVEPQ* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1870 930 Gene3D Phosphorylase Kinase; domain 1 579 684 - -
Pvu6g1870 930 MobiDBLite consensus disorder prediction 891 930 - -
Pvu6g1870 930 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Pvu6g1870 930 Gene3D Ribonuclease Inhibitor 284 390 IPR032675 -
Pvu6g1870 930 ProSitePatterns Protein kinases ATP-binding region signature. 615 641 IPR017441 GO:0005524
Pvu6g1870 930 SUPERFAMILY L domain-like 60 371 - -
Pvu6g1870 930 Pfam Leucine rich repeat 242 298 IPR001611 GO:0005515
Pvu6g1870 930 ProSiteProfiles Leucine-rich repeat profile. 337 358 IPR001611 GO:0005515
Pvu6g1870 930 PANTHER RECEPTOR-LIKE PROTEIN 55 2 912 - -
Pvu6g1870 930 CDD STKc_IRAK 615 880 - -
Pvu6g1870 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Pvu6g1870 930 ProSiteProfiles Protein kinase domain profile. 609 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1870 930 SUPERFAMILY Protein kinase-like (PK-like) 595 887 IPR011009 -
Pvu6g1870 930 Gene3D Ribonuclease Inhibitor 185 283 IPR032675 -
Pvu6g1870 930 Pfam Protein tyrosine and serine/threonine kinase 612 876 IPR001245 GO:0004672|GO:0006468
Pvu6g1870 930 Gene3D Transferase(Phosphotransferase) domain 1 685 898 - -
Pvu6g1870 930 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 2 912 - -
Pvu6g1870 930 SMART serkin_6 609 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1870 Pvu-Chr6 28986731 28993866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1870 1 930 Receptor kinase-like Gene Family AT5G49760 51.825 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu6g1870 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1870 - - gmx:100786172 1558.89