Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1855 ATGGGTTCACATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAGAAAGGCCGATCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAGACAATTATACTGGAAAAGAGTCTAGTGATTTAGCAAATGGTATTAAAAGTGAAAACCTTGTCTCACCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAGGCTTTACGTCGCATGAAAGGATTTTCAAAACTGAAGATCCTAACAGAAGGTTTCACTGTTACAAAGCAAGCCAGTGCAGCTATAACATATCTTCACTCATGGAGCAAGATACAAGGTGAGATCAGAGATCGTCGAATATGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAACTAGAGTCTCAATTAAAACTGGAAGCAAAACTTCATGATCTGGAGGTTGAATGGTCTGGTGGTTCTGAAACCATGGAGGAAATCCTTGGAAAGATACATCAGAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAAGTGCTTGGTAGTTATGAAGTTAGCAAGGCTAATTGGGGTTGGAGCTGGAAGGAACGGTGGATTGCTGCTCGACCTTGGGAAAGCCGTATCTCCAGTTTATCTGTCACCCCAGAGAAAGCTCAACATAAGCAACCAAACAAGGTTGAGAAGGATAAGAACGCATCAACACCAAAAACTCCAGTCTCAGTTAAACCTCCTTTAGCCATTGCAAAAGGGCCTCCTCCTTCTGCCAATGCAAAAGGCAATTCAAAAGCTAGGAGATTATCTTATCCACCAACTGCCCAGAAAACTGTGGTTCAAGGAGTGCAATGA 921 0.4267 MGSHWFKTIISLRKSKKGRSKKAKGILAQEKLNASKSDNYTGKESSDLANGIKSENLVSPGVSVETIAATRIQTAFRAYKARKALRRMKGFSKLKILTEGFTVTKQASAAITYLHSWSKIQGEIRDRRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGSETMEEILGKIHQREEAAVKRERAMAYAFSHQWRANSSQSQVLGSYEVSKANWGWSWKERWIAARPWESRISSLSVTPEKAQHKQPNKVEKDKNASTPKTPVSVKPPLAIAKGPPPSANAKGNSKARRLSYPPTAQKTVVQGVQ* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1855 306 MobiDBLite consensus disorder prediction 237 306 - -
Pvu6g1855 306 PANTHER IQ-DOMAIN 5-RELATED 3 297 - -
Pvu6g1855 306 MobiDBLite consensus disorder prediction 291 306 - -
Pvu6g1855 306 Pfam IQ calmodulin-binding motif 68 86 IPR000048 GO:0005515
Pvu6g1855 306 ProSiteProfiles IQ motif profile. 65 93 IPR000048 GO:0005515
Pvu6g1855 306 Gene3D - 20 126 - -
Pvu6g1855 306 PANTHER IQ-DOMAIN 9 3 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1855 Pvu-Chr6 28879054 28883263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1855 1 294 IQD Protein Family AT2G33990 50.847 2.48e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1855 - - vun:114186748 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1855 6 28879054 28883263 Pvu6g1855 6 28879054 28883263 ECH
Pvu6g1855 6 28879054 28883263 Pvu3g0593 3 7537545 7544062 ECH