Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1850 ATGGAAGAAGATCAGAGAAAAAACATGGAAAGGGTAAAAAGGTCAGAGCACAGTGTCATAATGCCTTCTCACCCTCCCTTCCTTCAGGATCACTCCCTCCCTCTCTCCCACCTGGACACGGACCCCAACCTCCACCTCACCTTCCGTTACCTCCGCGTCTACACTTCAACCGCTGCACCAACCACCCTCGACCCCTTCCACGTCATCTCCTCCTCCCTCTCCCACGCGCTAACCCAATTCTACCCCCTCGCCGCCATGCTTCGCCGCCGCCCAACCTCCCCCCACCGCCTCGAACTCTGGTGTGCCGCTGGCCAGGGCGTCCCCCTCGTCCGCGCCTCCGCCGACTGCACCCTCCACTCCGTCAACCACCTGGACGACCCGGCCTCGCCTCTCGCGGAGCAGTTGGTGCCCGACCCGGGTCCCGAGGAGGGGCTGGAGCACCCCTGCATACTCCAGGTGACGGTCTTCGCGTGTGGTGGGTTCGTCCTTGGCGCCGCCATTCACCATTCGCTGTGCGACGGCATGGGTGGCACGCTCTTCTTCAACGCGGTGGCGGAGCTGGCGCGTGGGGCCGCGCGGATGACGGTGGAGACGGTGTGGGAGCGTGACAGGTTGTTGGGTCCCAGGGAGCCGCCAAGAGTGGATTCAGCGTTGATCGACGAGTTTCTGCGTTTGGAAAAAGGGGCTTTGCCGTACGAAGAGGGTGTTGGTAGGGTTGCGAGAGAATGCTTTCATGTGAAGGATGAGAGCATGCACATGTTGAAGAGATCCTTGTCGGAGCAATCTGGGTTGAACTTCACCGTTTTTGAGGCTCTTGGAGCCTACATTTGGAGAGCCAAGGTGAGGACCTCTGGAATCCATGGTGAGGAGAAGGTGAAGTTTGCATATTCAATTAACATACGGAGAGTGGTGAAGGCAGCAATCCCTGATGGGTATTGGGGCAATGGTTGTGTTCCAATGTACGTGGTGATGAGTGCGAAGGAGTTGATAGAGAGACCCATTTGGGAAACTGCAGAGCTGATAAAAAAGAGTAAAAGTAATGTGAGTGATGAGTATGTGCAGTCGTACATAGATTATCAGGAGCTGCATTTTGGTGATGGGATAACAGCAGGAAGAGAGGTGAGTGGCTTCACTGATTGGAGGCATTTGGGGCATTCAACTGTGGATTTTGGGTGGGGAGGCCCAGTTACTGTTTTGCCCCTTGGGAGGAACCTGCTTGGGAGTGTTGAGCCTTGTTTCTTTTTGCCTTATTCAACTGCTTCTGCTCACAACAAAGATGGCTTCAAGGTTTTGGTCACTCTCAGAGACTCTGCATTGCCTGCTTTCAGACAAGCCATGCAACTGCTTTCCACTACCCAACACACAAGTCAAGACTTATAA 1380 0.5522 MEEDQRKNMERVKRSEHSVIMPSHPPFLQDHSLPLSHLDTDPNLHLTFRYLRVYTSTAAPTTLDPFHVISSSLSHALTQFYPLAAMLRRRPTSPHRLELWCAAGQGVPLVRASADCTLHSVNHLDDPASPLAEQLVPDPGPEEGLEHPCILQVTVFACGGFVLGAAIHHSLCDGMGGTLFFNAVAELARGAARMTVETVWERDRLLGPREPPRVDSALIDEFLRLEKGALPYEEGVGRVARECFHVKDESMHMLKRSLSEQSGLNFTVFEALGAYIWRAKVRTSGIHGEEKVKFAYSINIRRVVKAAIPDGYWGNGCVPMYVVMSAKELIERPIWETAELIKKSKSNVSDEYVQSYIDYQELHFGDGITAGREVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTASAHNKDGFKVLVTLRDSALPAFRQAMQLLSTTQHTSQDL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1850 459 Gene3D - 233 447 IPR023213 -
Pvu6g1850 459 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 11 450 - -
Pvu6g1850 459 Pfam Transferase family 12 448 - -
Pvu6g1850 459 Gene3D - 7 220 IPR023213 -
Pvu6g1850 459 PANTHER ACYL TRANSFERASE 4 11 450 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1850 42 446 Monolignol Biosynthesis Gene Families AT5G48930 27.273 1.09e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1850 - - vra:106774544 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1850 6 28857582 28859742 Pvu6g1850 6 28857582 28859742 ECH