Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1831 ATGTCAACCCCTTCATCATCTTCTTCTATTTGGGTGTTGTCTAACATAAAGCTTCAGTTCTTTGCCCGCATCAGACGGTTTCTCCAATCCAAAGCATCGAGAAAGCGTTTTGATCCCTCCGATCGGTTTGACACGGCTAAGAGCAGAGGTGAACACAAGAAGGCTGAAAATCTTGAAACAGTACAGGTTATGGAGAAGCCTGAAGAGGAGGAGGAAGAAGAAGTTTCTGAGATCATGTTCCAGAGAACTGTAAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAAGTGGCAGCAAAGGAGATTGAGAAGTTAGCCAAGGAAGATGTTAAGGTCAGAAAGTTGATAACAGAACTTGGGGTGGTGCCGGTGTTGGTATCTATGGCTGCGTCGCCAGTGGCTAGCCGCCGGCGAGCCGGATTGACGGCGTTGATCCACCTGGCTGATGGAACTTACACGAACAAGGCTTTGATCGTGGAGGCAGGAATATTGTCCAAGCTGCCAAAGACAATTGACCTTGTAGATGAATCAACAAGAAGTAAATTGGCAGAGTTGCTTCTGTCACTGTCATCTCTAGCAAACACTCAGTTCCATCTTGCTTCATTAGACTTTCTCCCATTACTTAAACACATTTTTGAGACAGACACCTGTTTTGACACCAAACAATCGTGTTTGGGTGCTTTGTATAACCTATCAACTGTATTAGAGAATGCATCCCCTATGGTTTCAAGTGGGGTGGTCCCTATCCTCTTGGAAGTGTCTTCATTAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTGTCCGTGACTTTGATGGGGAAAAAAGCAATAGAGAACAGCACAATGGTACCAGAAACCTTTATTGATATCTTGTCATGGGAAGATAAGCCTAAATGCCAAGAGTTATCGGTGTATATTTTAATGATTCTAGCACATCAAAGCTCATTGCAAAGAAAGAAAATGGTAGAGGCAGGGCTCGTTCCTGTGCTTCTTGAATTGGTTTTATTGGGCAGCCCTTTAGCTCAGAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGGCAAACTAGGATGGGGCCACATTCTGGTCCACAAACACCAAGATTTGCAATGGGGTCACCTGTAGATCAAAGAGAAGCAAAAGAAGGGAAGAGAATGATGAAGAGTTTGGTGAAACAAAGTTTGCACAGGAATATGGAAATGATAACTAACAGAGCAAATGCTGCAGGGGAGTCTTCTAAATTGAAGTCTTTGATTATCAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1305 0.4322 MSTPSSSSSIWVLSNIKLQFFARIRRFLQSKASRKRFDPSDRFDTAKSRGEHKKAENLETVQVMEKPEEEEEEEVSEIMFQRTVKMLHFGSWEEKEVAAKEIEKLAKEDVKVRKLITELGVVPVLVSMAASPVASRRRAGLTALIHLADGTYTNKALIVEAGILSKLPKTIDLVDESTRSKLAELLLSLSSLANTQFHLASLDFLPLLKHIFETDTCFDTKQSCLGALYNLSTVLENASPMVSSGVVPILLEVSSLKEISEKALATLGNLSVTLMGKKAIENSTMVPETFIDILSWEDKPKCQELSVYILMILAHQSSLQRKKMVEAGLVPVLLELVLLGSPLAQKRAMKLLQWFKDERQTRMGPHSGPQTPRFAMGSPVDQREAKEGKRMMKSLVKQSLHRNMEMITNRANAAGESSKLKSLIISTSSKSLPY* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1831 434 MobiDBLite consensus disorder prediction 361 387 - -
Pvu6g1831 434 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 69 434 - -
Pvu6g1831 434 Gene3D - 53 374 IPR011989 -
Pvu6g1831 434 SUPERFAMILY ARM repeat 84 355 IPR016024 -
Pvu6g1831 434 SMART arm_5 233 272 IPR000225 GO:0005515
Pvu6g1831 434 SMART arm_5 109 149 IPR000225 GO:0005515
Pvu6g1831 434 SMART arm_5 151 191 IPR000225 GO:0005515
Pvu6g1831 434 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 69 434 - -
Pvu6g1831 434 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1831 Pvu-Chr6 28695619 28698518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1831 93 372 U-box Gene Family AT1G67530 29.965 5.23e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1831 - - gmx:100813828 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1831 6 28695619 28698518 Pvu6g1831 6 28695619 28698518 ECH