Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1825 ATGCCCGACTTCAACGACTCCATCGCGCCGCCGTCGCGCCCCGTTCCCGTCCGCGAGGACTGCTGGTCCGAGGAGGCTTCTTCCACGCTCGTCGACGCCTGGGGCCGACGCTACCTCGAACTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTTGCGGACGCCGTTAACGCGCTCCACGGCCACACCAAGAAGACGCACCGCACAGACGTCCAGTGCAAGAACCGCATCGACACCATAAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCCTCCAATGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGATTGGATGCTCTGATTGGCCCTAATTTCAACGCCAAGAAACCTCCTTCCTCCTCGCCGTCTCCTTCGCCGCCTGTGGCTCTTCCGCTGCTGCCGCATCGTAAGAACCTTTCTTCCTCGCCTGCAATTGCGGTGACACCGACGGCCGTCGCGCTGCCCCAGAAGCGCTCCGCCGCTGCGGCGGCGATGGACGAGGGTTACTTCAGAAGGAATTACTCCGCTGTGGCTGCGGCTGCAGCGGCTGCGGAGGCTGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGCGGACGATGTGGAGGAGGAGGAGGAGGAAGATGAAGGGAGGGGGAGCGAGGTGGAGGAAGGGGAGAAGGAGAGAGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGAGAAGTGTATGAGAGAGTGGAGGGACAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAATTTGCTAAAGATCTTGAAGTCCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGCTCTAACGATATGTATAGCTAG 906 0.585 MPDFNDSIAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDALIGPNFNAKKPPSSSPSPSPPVALPLLPHRKNLSSSPAIAVTPTAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEEEEEEEEEEADDVEEEEEEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1825 301 Coils Coil 182 217 - -
Pvu6g1825 301 MobiDBLite consensus disorder prediction 123 137 - -
Pvu6g1825 301 PANTHER OS05G0560600 PROTEIN 9 297 - -
Pvu6g1825 301 MobiDBLite consensus disorder prediction 1 20 - -
Pvu6g1825 301 MobiDBLite consensus disorder prediction 190 220 - -
Pvu6g1825 301 MobiDBLite consensus disorder prediction 187 231 - -
Pvu6g1825 301 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 297 IPR044823 -
Pvu6g1825 301 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Pvu6g1825 301 MobiDBLite consensus disorder prediction 118 141 - -
Pvu6g1825 301 Gene3D - 22 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1825 Pvu-Chr6 28637663 28642747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1825 18 300 Trihelix Transcription Factor Family AT3G14180 34.734 2.42e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu6g1825 Myb_DNA-bind_4 5.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1825 - - gmx:100815241 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1825 6 28637663 28642747 Pvu6g1825 6 28637663 28642747 ECH