Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1816 ATGGAACCAAGAAGGAACACATTTGGATTTTGTCTAAGAATTTGTATTTGCTTGATCTCAGTGTGGGGAATCCGAGATTGTTGGTCCGTTAATGATGAAGGACTGGCTTTGTTAGCGTTCCAAGCGAGAATAACTTTTGATCCCTTTAATGCTTTGGTGAATTGGAATGCCAATGATAGTGACCCTTGCATGTGGTTCGGTGTTCATTGTGTAGATGGTAAAGTGCAAGTCTTGGACTTAAAAGGGTTATTATTGGAAGGGACATTGGCTCCTGAGCTTGGCAAACTTAGTCACCTAAATTCTATTGTATTATGCAAGAATAACTTTTCTGGTGCCATTCCCAAAGAACTTGGAGATTTACGCAAGCTAGAGTTATTAGATTTAAGGGAAAATAATTTGTCAGGAAACATCCCAGAAGAAATTGGCAGCATGTCATTATTAAAACACTTTGTGTGGCAACGGAACTTCAACCAATGGTACAAATCAGATTCATTGATTATTCTAACCAAAGCAACACTTACGAAATTTGCCAATAATGCCTTTGCTTGGCCACTATTCAAGCTAGGGAAGAGTGCCTCTCATGACCATAAAAAGGATTATTGTGACATTCTGCCTAGTTCTAATGTGCCAAAGATAGCCCGAAATGTACCAGAGTCTGTTTGTTCTGTACGTCGTAAGTTACTTCAGTCTAGTGGTAATAACCTTGCAGCTGCACCTTTCAGTGACAAACCAACAATAGAGTTTAGTTCTGCTCCAACCACCTTCAGTAGTGGAGCTTTTCCTGCTTTCCCAGATCCGCATTCTGATGCTCCTGATGATACTTCTGATGAAAATCAATCACACAATACTTTCGATGGAAATCAAACAAGTCAACATGTAAATAAAGGTGCTAATAGAAAAATGTGGAAGATTATAATTATTATTCTTCTTCTTGTGCTGGTCATTATTATCATAACTCTTATGTACATTTGGCGAAAACGAGCTGCAAGAGTAATAGGCCCCTGGAAGACAGGAATAAGTGGACAGTTGCAGAGAGCATTTATAACAGGGGTCCCCAAGTTGAATAGAGCAGAGTTAGAGACAGCCTGTGAAGATTTTAGCAATATTGTTGTTAATAGTTATGAAGGGTGCACCATCTACAAAGGAACATTGTCCAGTGGAGTTGAGATTGCTGTAGTTTCTACTCTAATTACTTCTTCTAAAAATTGGTCAAAGAGCATGGAGAGGCAATACCGCAAAAAGATTGATACTTTGTCTCGCATAAATCATAAGAACTTTATTAATCTTATTGGGTACTGCGAAGAAGAAGAACCATTCACTAGGATGTTGGTGTTTGAGTATGCTCCAAATGGAAACGTATATGAGCATTTACATGTTGATGAAATGGAACGTCTTGATTGGAGTGTAAGGATAAAAATTATCATGGGGATTGCGTATTGTCTTCAATACATGCACCATGACTTAAATCCACCTATGGCACAAGGCGAGCTTCTTTCAAGTATGATATGTTTAACAGATGATTTTGCTGCTAAGGTTGCAGAAGTTACTTTTAGAAAAATTGTGTCGCCAGAGGAGTCAGTGTGTGATTCAAAGAAATCTGATGTGTTCGAAGATGATATTGAAACCAATGTTTATGACTTTGGAATGTTATTACTCGAAATCATCTCAGGAAAATTACCTTACTCGGAAAAACATGGCAACCTGGTGGACTGTGCTGCTAAGTACTTAAAGGACGAAACAAGCTTCAAAGACTTGGTCGATCCCTCCCTCCAATCTTTCAAGGAGAATGAACTTAATTGCATTTGTGAGGTGATCCAAGATTGTATCCAACCTGATCCAAAGTTAAGAGTAACAATGAGGGAAGCGACTTCCAAATTAAGAGAAGTGCTTGGTCTGTCACCTGAGCAAGCTGTTCCAAGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATCTTGTCAGTGGAGGCGACTTAA 1974 0.3911 MEPRRNTFGFCLRICICLISVWGIRDCWSVNDEGLALLAFQARITFDPFNALVNWNANDSDPCMWFGVHCVDGKVQVLDLKGLLLEGTLAPELGKLSHLNSIVLCKNNFSGAIPKELGDLRKLELLDLRENNLSGNIPEEIGSMSLLKHFVWQRNFNQWYKSDSLIILTKATLTKFANNAFAWPLFKLGKSASHDHKKDYCDILPSSNVPKIARNVPESVCSVRRKLLQSSGNNLAAAPFSDKPTIEFSSAPTTFSSGAFPAFPDPHSDAPDDTSDENQSHNTFDGNQTSQHVNKGANRKMWKIIIIILLLVLVIIIITLMYIWRKRAARVIGPWKTGISGQLQRAFITGVPKLNRAELETACEDFSNIVVNSYEGCTIYKGTLSSGVEIAVVSTLITSSKNWSKSMERQYRKKIDTLSRINHKNFINLIGYCEEEEPFTRMLVFEYAPNGNVYEHLHVDEMERLDWSVRIKIIMGIAYCLQYMHHDLNPPMAQGELLSSMICLTDDFAAKVAEVTFRKIVSPEESVCDSKKSDVFEDDIETNVYDFGMLLLEIISGKLPYSEKHGNLVDCAAKYLKDETSFKDLVDPSLQSFKENELNCICEVIQDCIQPDPKLRVTMREATSKLREVLGLSPEQAVPRLSPLWWAELEILSVEAT* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1816 657 PANTHER PROTEIN MALE DISCOVERER 2 1 657 - -
Pvu6g1816 657 SUPERFAMILY L domain-like 29 170 - -
Pvu6g1816 657 SUPERFAMILY Protein kinase-like (PK-like) 378 625 IPR011009 -
Pvu6g1816 657 Gene3D Ribonuclease Inhibitor 30 209 IPR032675 -
Pvu6g1816 657 MobiDBLite consensus disorder prediction 266 292 - -
Pvu6g1816 657 Pfam Protein tyrosine and serine/threonine kinase 378 626 IPR001245 GO:0004672|GO:0006468
Pvu6g1816 657 PANTHER LRR RECEPTOR-LIKE KINASE 1 657 - -
Pvu6g1816 657 Gene3D Transferase(Phosphotransferase) domain 1 448 636 - -
Pvu6g1816 657 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pvu6g1816 657 ProSiteProfiles Protein kinase domain profile. 326 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1816 657 Gene3D Phosphorylase Kinase; domain 1 339 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1816 Pvu-Chr6 28551686 28557267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1816 47 626 Receptor kinase-like Gene Family AT5G45780 25.738 5.33e-40 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu6g1816 PK_Tyr_Ser-Thr 2.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1816 - - vun:114189247 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1816 6 28551686 28557267 Pvu6g1816 6 28551686 28557267 ECH