Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1814 ATGGAGAAAAATGTTCTCATGCAAAAGTATGAAATTGGACGTTTCCTTGGACAAGGAAATTTCGCCAAAGTTTACCATGCAAAGAACTTGAAGACAGGTCAGAGCGTGGCCGTGAAAGTAATCAACAAAGAGATGATGATGAAGGTGGGTATGGAGGAGCAAATCAAGCGTGAAATCTCAGTGATGCGCCTTGTGAGGCACCCCAACGTTGTGCAGCTGTATGAGGTGATGGCAACCAAGAAAAAGATATATTTTGCAATGGAAATGGTGAAAGGTGGTGAACTTTTTGATAAAGTGTCCAGAGGGAGGTTGAGGGAGGATGTAGCAAGAAAATATTTTCAGCAGCTGATTGATGCTGTTGATTACTGCCACAGCCTAGGGGTGTGTCATCGTGATCTCAAGCCAGAGAACCTTCTTGTTGATGAAAATGGGGACCTCAAAATTACAGATTTTGGTTTGAGCGCATTGGTTGAGTCCAGAAAGAACAATGGCCTTCTTCACACAGTATGTGGAACTCCAGCCTATGTAGCTCCTGAGGTGATAAAGAAGAAAGGATATGACGGAGCCAAGGCAGATATATGGTCTTGTGGAGTGATTCTGTATGTTCTTTTGGCAGGTTTTGTTCCTTTCAGTGATAAAAATTTGATGGAGATGTATAAGAAGATTATCAAAGCAGATTGCCAATTCCCAAAATGGTTCTCTCCAGATGTAAACAGACTTATTTATAGGATCCTTGATCCGAATCCAACGAGGAGAATTACTATTGCTAAGATTGTGCAAAGTCGTTGGTTTAGAAAGGGGTATGTGCAGATTCAAGAATTTCAGCTGCCGCCATTGTTCCCTAGAAATGGTGCTGATATCTTGGATGTTCAGGTTGCATTTGGTTCATCAGATTCAGATGGCAGTCCAATGTCAATTAAAGAAGAAAGCCCCCTGAAGCTATATCAATTCAATGCATTTGATTTGATATCACTATCATCAGGTCTTGATCTTTCTGGTTTGTTTGAAAATGATCAGAATGAAAGACAACTGACGAGATTTACTACAAGAGAAACACCTTCAACTGTTGTATCAATGCTTGAAGAGATAGCACAGATAGATGATAAATTTAAAGTCTCTAAGAAAGATGGGGTAGTTAGATTGGAGGGATGCCAGACGGGGATAAAAGGCCAACTCACTCTAGATGCAGAAATTTTTGAACTTACATCTTCCTTGCATGTTGTCGAGGTAAAAAAAATTGCTGGAAACACATTGGAATATTTCAAATTCAGGGAACAGTACTTGAAACCTTATCTGAATGAAATAATTTAA 1311 0.3982 MEKNVLMQKYEIGRFLGQGNFAKVYHAKNLKTGQSVAVKVINKEMMMKVGMEEQIKREISVMRLVRHPNVVQLYEVMATKKKIYFAMEMVKGGELFDKVSRGRLREDVARKYFQQLIDAVDYCHSLGVCHRDLKPENLLVDENGDLKITDFGLSALVESRKNNGLLHTVCGTPAYVAPEVIKKKGYDGAKADIWSCGVILYVLLAGFVPFSDKNLMEMYKKIIKADCQFPKWFSPDVNRLIYRILDPNPTRRITIAKIVQSRWFRKGYVQIQEFQLPPLFPRNGADILDVQVAFGSSDSDGSPMSIKEESPLKLYQFNAFDLISLSSGLDLSGLFENDQNERQLTRFTTRETPSTVVSMLEEIAQIDDKFKVSKKDGVVRLEGCQTGIKGQLTLDAEIFELTSSLHVVEVKKIAGNTLEYFKFREQYLKPYLNEII* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1814 436 CDD STKc_SnRK3 9 263 - -
Pvu6g1814 436 Gene3D Kinase associated domain 1, KA1 313 436 - -
Pvu6g1814 436 CDD CIPK_C 318 433 - -
Pvu6g1814 436 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 436 - -
Pvu6g1814 436 Gene3D Transferase(Phosphotransferase) domain 1 1 294 - -
Pvu6g1814 436 Pfam Protein kinase domain 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1814 436 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Pvu6g1814 436 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Pvu6g1814 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pvu6g1814 436 ProSiteProfiles Protein kinase domain profile. 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1814 436 PANTHER - 4 436 - -
Pvu6g1814 436 SMART serkin_6 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1814 436 SUPERFAMILY Protein kinase-like (PK-like) 6 305 IPR011009 -
Pvu6g1814 436 Pfam NAF domain 317 374 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1814 Pvu-Chr6 28529990 28531300 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1814 1 436 CBL-interacting serine-threonine protein kinases AT5G45820 60.137 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu6g1814 Pkinase 1.6e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1814 K07198 - gmx:100807927 707.212