Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1810 ATGGCTGAGGATAAGGAGATGTCCTCCTCTGTCATCAATGGCAATGATTCCCTCACTGGTCACATTATATCTACAACTATTGGAGGCAAAAACGGGGAGCCCAAACAGACTATTAGTTACAAGGCCGAACGAGTTGTAGGAACTGGCTCATTTGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAGGCAGTGGCAATTAAAAAGGTTTTACAGGACAGAAGATACAAGAACCGTGAACTACAGTTAATGCGTGTTTTGGATCATCCAAATGTGATCTCACTGAAGCATTGTTTCTTTTCAACTACAAGTACAGACGAACTTTTTCTAAATTTGGTGATGGAATATGTTCCAGAGTCCATGTATAGAGTCTTAAAGCACTATAGCAATGCTAATCAAAGAATGCCAATCATCTATGTGAAACTTTACATGTACCAGATTTTTAGGGGATTGGCTTATATCCACACTGTTCCCAAAGTTTGCCACAGAGACTTGAAGCCTCAAAATATTCTGGTGGATCCTCTTACACACCAAGTGAAGCTATGTGATTTTGGAAGTGCCAAAGTTCTAGTAAAAGGTGAAGCTAATATATCATACATATGTTCACGATTCTATCGTGCCCCAGAACTTATATTTGGTGCCACGGAGTATACAGCTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTCTGGGCCAG 714 0.4076 MAEDKEMSSSVINGNDSLTGHIISTTIGGKNGEPKQTISYKAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVLDHPNVISLKHCFFSTTSTDELFLNLVMEYVPESMYRVLKHYSNANQRMPIIYVKLYMYQIFRGLAYIHTVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTASIDIWSAGCVLAELLLGQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1810 238 SUPERFAMILY Protein kinase-like (PK-like) 39 238 IPR011009 -
Pvu6g1810 238 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Pvu6g1810 238 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 238 - -
Pvu6g1810 238 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pvu6g1810 238 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Pvu6g1810 238 SMART serkin_6 40 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1810 238 ProSiteProfiles Protein kinase domain profile. 40 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1810 238 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA 1 238 - -
Pvu6g1810 238 CDD STKc_GSK3 35 238 IPR039192 -
Pvu6g1810 238 Gene3D Transferase(Phosphotransferase) domain 1 120 238 - -
Pvu6g1810 238 Pfam Protein kinase domain 40 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1810 Pvu-Chr6 28491210 28494006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1810 40 238 MAP Kinase Gene Family AT5G19010 38.863 1.07e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pvu6g1810 Pkinase 4.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1810 K14502 - gmx:100779909 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2466 2 40606704 40613808 Pvu6g1810 6 28491210 28494006 PCT