Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1800 ATGAAGAGCGCTTGTGATGAATGGAAACCTTTTATAGTAATGATAGCAAGTGATTTTTCTTTTGCGGTAGTGAATGTTCTTCTCAAGAAAGTCCTTGAAGAGGGGGTGAACCATTTGGTTTTTATCACATACCGGTTGACAATTGCTACCATTTTCATAGCCCCAGTCGCCTACTTTAGGGAAAGAAACGACAGACCAAGACTCACATTTCGAATTTTATGTTACCTCTTCTGCAGTGCCATTGTTGGGGCATCAGTCACTCAATACTTTGTCCTTCTGGGGATCCAATATACTTCTGCTACCTTCTCTTGTGCTTTCATCAACATGGTGCCAGTGGTCACATTCATGATGGCGTTACCTTTTGGATTAGAGACTGTGAAAATCAAATGCAAGAGTGGGAGAGCTAAGATTCTTGGTTCATTGGTGTGCATAGGTGGTGCATTGATGTTGACACTTTACAAAGGAAAGCCACTGTTTCATTTTTCTCACCACGAATCCGCAGCTTCTATGACCAAGAGTTCTGCAGAGAAGCCATATTCTACAAACACAACGGGGAGATGGACTATTGGTGTGATAGCCATGGTTATGGGGACTATGTTTTGGTCTTCTTGGTATATTTTACAGTCAAAAATAAGCAAGAGATATCCATGCCAGTATTCTAGCACAGCCATCATGAGCTTCTTTGGAGCCGTTCAAGCAGCTGTTATTTGCTTTTGCACTGACCACAACTTCTCCATTTGGGTTCTCAAGGGAAAGATGCAAATAATTGCTTTTCTATTTTCTGGGGTGGTAGGATCAGGTTTGTGTTTTGTGGGAATGTCATGGTGTGTGAAGAAGAGGGGTCCTGTCTTTACTGCAGCATTCAGTCCTCTAGTTCAGATAATAGCAGCAATGATTGATATCCCTGTCTTGCACGAACAGCTCCATCTTGGAAGTGTGATGGGATCCATCTTAGTGATTATTGGATTATACATTGTTCTATGGGGTAAGAGCATCGAAATGAAGAATCGTGTGATAAAGTTAGTCCAAGAAGCTGAAGAAACCAAGGAACAAGAGGCGCAGCCTCAAATACAACAGTTGACAGTGTATGTTCACAGAGAATCGTGTGATCCATAG 1116 0.4194 MKSACDEWKPFIVMIASDFSFAVVNVLLKKVLEEGVNHLVFITYRLTIATIFIAPVAYFRERNDRPRLTFRILCYLFCSAIVGASVTQYFVLLGIQYTSATFSCAFINMVPVVTFMMALPFGLETVKIKCKSGRAKILGSLVCIGGALMLTLYKGKPLFHFSHHESAASMTKSSAEKPYSTNTTGRWTIGVIAMVMGTMFWSSWYILQSKISKRYPCQYSSTAIMSFFGAVQAAVICFCTDHNFSIWVLKGKMQIIAFLFSGVVGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIIAAMIDIPVLHEQLHLGSVMGSILVIIGLYIVLWGKSIEMKNRVIKLVQEAEETKEQEAQPQIQQLTVYVHRESCDP* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1800 371 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Pvu6g1800 371 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Pvu6g1800 371 PANTHER WAT1-RELATED PROTEIN 10 351 - -
Pvu6g1800 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Pvu6g1800 371 Coils Coil 331 351 - -
Pvu6g1800 371 PANTHER WAT1-RELATED PROTEIN 10 351 IPR030184 GO:0016021|GO:0022857
Pvu6g1800 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1800 Pvu-Chr6 28432028 28434405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1800 8 261 Nodulin-like Gene Family AT3G30340 48.438 2.82e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1800 - - gmx:100803670 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2474 2 40710816 40713398 Pvu6g1800 6 28432028 28434405 PCT