Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1773 ATGGCTGATTTGAACCATGACGCTGATTCCTCCAAAAGTTCTGATCACAACGAAGCCTCTGTGACCCTTTTGCAGAAGTTGGTGGCAGAAGCGGTGGGGACGTACTTTTTGGTATTCGCAGGGTGTAGTTCGATTGTGGTGAACCTTGGTAACGACAAGGTGGTGACACAACCTGGGATTTCGATTGTTTGGGGACTCGCTGTTACGGTTTTGGTTTACTCTGTTGGTCACATCTCTGGTGCTCATTTCAACCCTGCAGTCACCATTGCTCATGCCTCCATCAAAAGGTTTCCTTTAAAGGAGGTACCAGCATATATAGTAGCCCAGGTTGTTGGAGCCATACTTGCCAGTGGAACTCTGAGACTTGTATTCCGAGGCAAGGGTGACCATTTTGCAGGAACAGTCCCTGCCGGTTCTGATATGCAAGCTTTTGTCGTGGAATTCTTGATCACTTTCTTTCTCATGTTCGTCATTTCTGGAGTTGCCACCGATGACAGAGCGATTGGTGAGTTGGCAGGGGTGGCAGTTGGGTCAACGGTACTGCTAAATGTGATGATTGCCGGGCCAATCACCGGAGCGTCAATGAATCCAGCAAGAAGCTTGGGGCCTGCTATTTTGCACCATGAGTATAGAGGAATATGGATATATATGGTGTCACCAATTGTTGGAGCTTTAGCTGCTACATGGCTCTACAATTTCATCAGTTACACAAACAAGCCAGCGCGTGAGATCACCAGGACTCCCTCTTTCCTCCAAGGGCGTCTTCAAGCTCACTGA 777 0.4826 MADLNHDADSSKSSDHNEASVTLLQKLVAEAVGTYFLVFAGCSSIVVNLGNDKVVTQPGISIVWGLAVTVLVYSVGHISGAHFNPAVTIAHASIKRFPLKEVPAYIVAQVVGAILASGTLRLVFRGKGDHFAGTVPAGSDMQAFVVEFLITFFLMFVISGVATDDRAIGELAGVAVGSTVLLNVMIAGPITGASMNPARSLGPAILHHEYRGIWIYMVSPIVGALAATWLYNFISYTNKPAREITRTPSFLQGRLQAH* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1773 258 SUPERFAMILY Aquaporin-like 21 243 IPR023271 -
Pvu6g1773 258 PRINTS Major intrinsic protein family signature 25 44 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 Pfam Major intrinsic protein 20 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 Gene3D Glycerol uptake facilitator protein. 2 245 IPR023271 -
Pvu6g1773 258 TIGRFAM MIP: MIP family channel proteins 29 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 CDD MIP 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu6g1773 258 ProSitePatterns MIP family signature. 82 90 IPR022357 -
Pvu6g1773 258 PANTHER AQUAPORIN NIP2-1 3 253 IPR034294 -
Pvu6g1773 258 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 3 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1773 Pvu-Chr6 28175987 28178194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1773 21 256 Major Intrinsic Protein MIP AT5G37820 58.051 1.23e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1773 K09874 - gmx:100812577 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2493 2 40911395 40913221 Pvu6g1773 6 28175987 28178194 PCT