Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1769 ATGAGAGCTGTCAATTTCTTTATCTTCCTTTTTATTGCTCTAAGTTGCTTCCAATTGCTGAGAGTTTCTGCATCAAAAGTACCCCAAGAAGAAGTTGTTGCCCTCAGAGAAATTGCGAGTGCGATGGGTTCGAAATATTGGAAATTTGATGCTGATTCATGCAGTATTGAAATGGTTGGACTAACGCAAGAGCCACCAGCTGAATCAGAGAGAAGCATTGGTTGTGACTGCAGTTTTGAAGACAATGCTGTCTGTCATGTTGTGAAGATGACTCTCAAGCGCCTTAGTCTACCTGGCACACTCCCACCTCAACTGGCCAAGCTACCTTTTCTCCGAGAAGTAGATTTTGCTTACAATTGCTTCACCGGTTCGATTCCAGAGGAATGGGCTTCAATGAAATTAACTTCAATGATGCTTGAAGGAAACCAATTTTCTGGTGCTGTTCCACCGGAGCTTGGGAAACTAATTAACTTGCAGACATTGGTTCTGTCCTCCAATCAATTGACTGGGAACTTACCACTTACATTTGCTGGACTACAAAATTTGACTGACTTTAGAATAAATGATAACAATTTTACTGGAACAATACCTAGTTTCATACCGAGCTGGCAACTTCTCCAAAGATTAGAAATGTATGCAAGTGGACTAGAGGGACCCTTCCCATCAAATATCTCTCTCTTGAAGAACTTAGTTATGCTAAGAATCAGTGATATAGAAAGTCCTGCCCAGGTCTTTCCACATCTGGAAAACATGGAAAAGTTGAGTATATTGGTTCTAAGGAGTTGTAACTTATCTGGTGTTATACCTTCATACGTCTGGACAATGAGGAATTTGGCGGTTCTGGATGTCAGTTTTAACAAGCTCGTTGGGGAAATTTCATCAATTGTAAGTGCAAGGCGTCTGAGATTTATCTACCTAACAGGTAACATGCTTAGTGGCAATATACCCAATTCAATCCTGAAGGATGGAAGTAGCATTGATCTATCATATAACAACTTTACTTGGCAAGACGAAACTTCTTGTAAGGATGGCATTAGGAACTTGAATCTGAATCTGTTCAGAAGCTCGATTCGAAAGAATAAGTTAGAGGAGTATGTTCCTTGCTCCAAGAATTTCAGCTGTTCACGCTTTTCAAGTTGTTTACATGTTAACTGCGGTGGGAAGGATGTAAGTGTTAAAGATGATAAAGGAGAAAACCTTTATGTGGGAGACGAAGATGTTCAGGGTGGCGCTGCAACTTATTTCTACAGTAATGATGATCACTGGGGATTTAGTAGCACCGGGGACTTCATGGATGATTTTGAGTCCCAGAACGTACGTTACATTGTATCTCTGCCATCTTCAAATATGCCAGAATTATACAAAACGGCGCGTGTATCTCCAATTACACTTACTTATTTCCACAACTGCATGGCAAATGGGAACTATACTGTAAACCTTCACTTTGCTGAAATAAAGTTTACAAATGATAAAACATATAAAAGTCTTGGGAAGCGCATATTTGATATCTATGTTCAGGGAAGAAGGGCTCGCAAAAATTTTAATATAGAGAATGAGACAAATGTTACTGAAAAACCACTGGTACTGCCAATACACAATATCGGAATCACAAATAATATCTTGGAGATCAGATTCTACTGGGCTGGAAAAGGAACGACTAGAATTCCTGATGTTGGAGTTTATGGTCCACTTGTATCAGCTATATCTGTGGTTTCAGATTCTAGAATTTGCTCAAATGGAGAAAAGAAAGTTGATCGTTCGATAATCATTGCCATCGTAGCCGGTGCTCTATGCTCAGTGCTATTTTTATCTGGACTCATTTGGTGGAAGTGGAAAGGCTTTTTCAGAGGGAAACTGCAAAAGAAAGAAGGTGCAAAAGATGGAGATATTCAGGCAGGCAATTTTAGCTTGGAGCATATCAGAGCTGCCACCAATGACTTCTCTTCTGCTAATAAGATTGGAGAAGGCGGTTTTGGTCCCGTATACAAGGGTGAATTGCTAGATGGTACTTTTATAGCGGTCAAGCAATTGTCATCACAATCACGGCAGGGAAATCGTGAATTTATAAATGAAATAGGCTTGATATCTTGTGTGCAACACCCCAACCTCGTAAAGCTTCATGGATATTGTGCTGAAGGGGAACAACTTTTGTTGGTATATGAGTACATGGAAAATAACAGCCTTGCCCGAGCTTTATTTGGTAGTGAGAACCGTCAGCTTAAATTGGATTGGCCCACAAGGTTTAGGATTTGCATTGGCATAGCAAAGGGTCTAGCATTTCTCCATGATGAGTCAAGATTCAAGATAGTACACAGAGATATCAAGGCTTCTAATGTGTTACTCGATGGCGATTTGAATCCAAAAATATCTGACTTTGGCTTGGCTAGGCTTGATGAAGCAGAGAAGACCCATATCAGCACCCGAGTTGCTGGAACCATAGGGTATATGGCACCAGAATATGCATTATGGGGCCATCTTACATACAAAGCCGATGTTTACAGTTTTGGAGTTCTAGCATTAGAAATTGTTAGTGGGAAAAACAATAACAATTATTTACCAGACGATGGAAGTACTTGTCTTTTGGATTGGGCATGTCAATTAAATCAAGCTAAGAAATTAGTGGGGCTTGTTGATGAAAGGTTGGGACCAGACCTTAATAAAACAGAAGTAGAAAAGGTGGTCAGAATAGCTCTTCTGTGCACAAATGTTTCTCTATCACTTAGGCCTACAATGTCTGAGGTGGTGAATATGCTTGAAGGACATTTAGATATTCCTGATGCAATCCCAGAACCAAGTACCTACAGTGAAGATTTAAGGTTCAAAGCCTTAAGGGATCTCAATGAACATCGATCAAAGCAGAGTTTGAGTGTAAACCAGAGCCAGAATTCATCAACTCATACATTCAGCTCAGCATCTGCTAGTAATACTCACACTAGTAGTAATATTGAGGATTATTGTTCAGTTGACAATAGTTAG 2976 0.3995 MRAVNFFIFLFIALSCFQLLRVSASKVPQEEVVALREIASAMGSKYWKFDADSCSIEMVGLTQEPPAESERSIGCDCSFEDNAVCHVVKMTLKRLSLPGTLPPQLAKLPFLREVDFAYNCFTGSIPEEWASMKLTSMMLEGNQFSGAVPPELGKLINLQTLVLSSNQLTGNLPLTFAGLQNLTDFRINDNNFTGTIPSFIPSWQLLQRLEMYASGLEGPFPSNISLLKNLVMLRISDIESPAQVFPHLENMEKLSILVLRSCNLSGVIPSYVWTMRNLAVLDVSFNKLVGEISSIVSARRLRFIYLTGNMLSGNIPNSILKDGSSIDLSYNNFTWQDETSCKDGIRNLNLNLFRSSIRKNKLEEYVPCSKNFSCSRFSSCLHVNCGGKDVSVKDDKGENLYVGDEDVQGGAATYFYSNDDHWGFSSTGDFMDDFESQNVRYIVSLPSSNMPELYKTARVSPITLTYFHNCMANGNYTVNLHFAEIKFTNDKTYKSLGKRIFDIYVQGRRARKNFNIENETNVTEKPLVLPIHNIGITNNILEIRFYWAGKGTTRIPDVGVYGPLVSAISVVSDSRICSNGEKKVDRSIIIAIVAGALCSVLFLSGLIWWKWKGFFRGKLQKKEGAKDGDIQAGNFSLEHIRAATNDFSSANKIGEGGFGPVYKGELLDGTFIAVKQLSSQSRQGNREFINEIGLISCVQHPNLVKLHGYCAEGEQLLLVYEYMENNSLARALFGSENRQLKLDWPTRFRICIGIAKGLAFLHDESRFKIVHRDIKASNVLLDGDLNPKISDFGLARLDEAEKTHISTRVAGTIGYMAPEYALWGHLTYKADVYSFGVLALEIVSGKNNNNYLPDDGSTCLLDWACQLNQAKKLVGLVDERLGPDLNKTEVEKVVRIALLCTNVSLSLRPTMSEVVNMLEGHLDIPDAIPEPSTYSEDLRFKALRDLNEHRSKQSLSVNQSQNSSTHTFSSASASNTHTSSNIEDYCSVDNS* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1769 991 Gene3D Phosphorylase Kinase; domain 1 616 722 - -
Pvu6g1769 991 SUPERFAMILY Protein kinase-like (PK-like) 632 941 IPR011009 -
Pvu6g1769 991 Gene3D Ribonuclease Inhibitor 242 343 IPR032675 -
Pvu6g1769 991 Pfam Protein tyrosine and serine/threonine kinase 650 918 IPR001245 GO:0004672|GO:0006468
Pvu6g1769 991 SUPERFAMILY L domain-like 84 334 - -
Pvu6g1769 991 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Pvu6g1769 991 Pfam Malectin domain 380 568 IPR021720 -
Pvu6g1769 991 Gene3D Transferase(Phosphotransferase) domain 1 723 927 - -
Pvu6g1769 991 Gene3D - 378 575 - -
Pvu6g1769 991 CDD STKc_IRAK 653 920 - -
Pvu6g1769 991 SMART serkin_6 647 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1769 991 Gene3D Ribonuclease Inhibitor 28 241 IPR032675 -
Pvu6g1769 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Pvu6g1769 991 ProSiteProfiles Protein kinase domain profile. 647 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1769 991 MobiDBLite consensus disorder prediction 952 991 - -
Pvu6g1769 991 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 967 - -
Pvu6g1769 991 MobiDBLite consensus disorder prediction 951 991 - -
Pvu6g1769 991 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 71 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1769 Pvu-Chr6 28146011 28155813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1769 4 813 Receptor kinase-like Gene Family AT1G29750 55.569 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu6g1769 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1769 - - qlo:115990047 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2496 2 40926783 40940156 Pvu6g1769 6 28146011 28155813 PCT