Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1731 ATGTTAGTTGAGACTACCTGTGCTCGTGATTCTGGGATGAGTTCAGAGACTGTCAATTCCACGCAACGAACTTCCATGAGCAACGAGAGCGTTTGCAGCACCAGCTTCAGCCGCCTCTCCTTCGACCTCCCCCCTTCCTCCTCCTCGCCGGAGAGCCTGTTCGTCAAGCCGCACCGCTCCTCCGACTTCGCCTACTCCACCATCTTCCGCCGCCACTCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGACATCGGAACCGTGTACCTCTGCCGCCTCCGCCACGACGAGGAGGAGTGCTTCTACGCGATGAAGGTGGTGGACAAGGAGGCGGTGGCGTTGAAGAAGAAGGCGCAGAGAGCGGAGATGGAGAGAAAGATTCTGAAGATGGTGGACCACCCCTTCCTCCCTACGCTCTACGCGGAGTTCGAGGCCTCGCATTTCTCTTGCATTGTGATGGAGTATTGCTCCGGTGGAGACTTGCACTCCCTTCGACACAACCACCCTAACAAACGCTTCTCTCTCTCCTCTGCCAGGTTTTACGCGGCTGAAGTACTGGTGGCGTTGGAGTATCTCCACATGCTGGGAATAATCTACAGGGATCTAAAGCCAGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTCTGCTCCCATGCAATCCCCGCCGTTGAATCCCCTGACTGTTCCCTCGATCCTGCATTCGCACGCACGTTACCCTACACCCGCCAGTACTCCACTCCGTTCTCCTGCCTCTCCAACCGCGTCTTCCGCTCCAGGAAGGTTCAAACCCTCCAACCGAACCGCCTCTTTGTGGCCGAACCGGTTGGGGCTCGCTCCTGCTCCTTCGTGGGGACACACGAGTACGTATCACCGGAAGTGGCCTCCGGGAACTCCCACGGCAACGCCGTCGACTGGTGGTCCTTCGGGATATTCATCTACGAGATGGTGTACAGTCGCACACCCTTCGCGGGCTCATCGAACGAGGCTACGCTGCGCAACATCATAAAAAACTCCCTCGCCTTTCCCACCGCCACTCCCTCCACCACGCTTGAAACGCACGCGCGGGACCTCATCTCCAGGTTGCTCAACAAGGACCCGAACCGCAGGCTTGGGTCAAAGCGCGGCGCCGCCGACGTCAAGAAGCACCCTTTCTTCGCTGGGCTCAATCTCGCGCTCATACGAATGGTGACGCCGCCGGAGGTTCCCTCCCTCAGAAGACACAAAACGACGCCGTTTTGCCCCGCTAACGATAACGGCAACGTAAATAACAGCAGGCATGAGCTAACGGCGTTTGATTACTTTTGA 1350 0.5793 MLVETTCARDSGMSSETVNSTQRTSMSNESVCSTSFSRLSFDLPPSSSSPESLFVKPHRSSDFAYSTIFRRHSALTFRDFHLLRRIGAGDIGTVYLCRLRHDEEECFYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHNHPNKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVESPDCSLDPAFARTLPYTRQYSTPFSCLSNRVFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYSRTPFAGSSNEATLRNIIKNSLAFPTATPSTTLETHARDLISRLLNKDPNRRLGSKRGAADVKKHPFFAGLNLALIRMVTPPEVPSLRRHKTTPFCPANDNGNVNNSRHELTAFDYF* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1731 449 MobiDBLite consensus disorder prediction 8 26 - -
Pvu6g1731 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pvu6g1731 449 ProSiteProfiles Protein kinase domain profile. 80 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1731 449 Gene3D Transferase(Phosphotransferase) domain 1 293 418 - -
Pvu6g1731 449 Gene3D Phosphorylase Kinase; domain 1 78 161 - -
Pvu6g1731 449 SMART serkin_6 80 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1731 449 Gene3D Transferase(Phosphotransferase) domain 1 162 229 - -
Pvu6g1731 449 MobiDBLite consensus disorder prediction 1 26 - -
Pvu6g1731 449 Pfam Protein kinase domain 295 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1731 449 Pfam Protein kinase domain 80 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g1731 449 CDD STKc_phototropin_like 78 421 - -
Pvu6g1731 449 Coils Coil 110 130 - -
Pvu6g1731 449 PANTHER FLIPPASE KINASE 1-RELATED 6 448 - -
Pvu6g1731 449 SUPERFAMILY Protein kinase-like (PK-like) 60 421 IPR011009 -
Pvu6g1731 449 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 6 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1731 Pvu-Chr6 27785733 27788423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1731 10 449 AGC Kinase Gene Family AT2G34650 66.519 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu6g1731 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1731 - - gmx:100795536 779.63